Pedobacter heparinus: Phep_1469
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Entry
Phep_1469 CDS
T00978
Name
(GenBank) exonuclease V subunit alpha
Organism
phe
Pedobacter heparinus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
UvrD_C_2
AAA_19
PIF1
SLFN-g3_helicase
AAA_22
Helicase_RecD
TsaE
SH3_13
CbiA
AAA_16
AAA_33
AAA_7
TraI_hel_assoc_N
Thymidylate_kin
NACHT
SRP54
ResIII
Flavi_DEAD
TrwB_AAD_bind
AAA
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ACU03683
UniProt:
C6XTP7
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Position
1742183..1743625
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AA seq
480 aa
AA seq
DB search
MDKAAIIAGAYAFTPTAEQLDFCREMAEFLSHGLDNQCFILRGYAGTGKTTSVAALVKAL
PQFKYRSVLLAPTGRAAKVMSNYTGKKALTIHKKIYRKRAAVATDLSFQLAPNLAEHTLF
IVDEASMVADEWITHTGSSFLKDLMAFVYNGKNCALVFVGDTAQLPPVGSIDSPALNKAY
LASNFGKLVSAVELKEVVRQEKRSGILANATMLRQLINNLEAENEGKVVLPKFMTKNYKD
IFRMTGLKLVEGLEYAYGKFGIENSLVVCRSNKSANVYNQQIRARLLYREEELTGGDQIM
VVRNNYFWLPENESTAFIANGDMARVVRVRRTEERYGFRFAEVQLEFLDFPDVGTVTCKV
MLDTLTVEAPNLSYEQSNKLFEELNIDYEHIKNKRERFNAIKEDPYYNALQIKFAYAVTC
HKAQGGQWDAVFVDQGYLTDEMVDMDFLRWLYTGVTRAKRELFLVNFAPNLFLAPAEDQF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggataaagcagcaattatagcaggggcatacgcttttacaccaaccgctgaacagctt
gatttttgcagggaaatggctgagtttttatcgcatggactggataaccagtgttttata
ttaaggggctatgcaggtacgggtaaaaccacctccgtagctgcactggtcaaggctttg
ccgcagtttaagtatcgttctgtattgctggcgcccacaggcagggctgcaaaagtaatg
agcaattacacaggtaaaaaagcgcttaccatccataaaaaaatatacaggaaacgtgct
gcagtagctacagacctttcctttcagcttgcgcccaatctggccgaacataccctgttt
attgtggatgaagcctccatggttgcggatgagtggattacccatacaggctcttctttt
ttaaaggatttaatggcgtttgtgtacaatggtaaaaactgtgccctggtctttgtaggg
gatacagcccagctgccaccagttgggagtatagacagccctgctttaaacaaagcatac
ctggcatcaaattttggtaagctggtaagtgctgttgaacttaaggaggtggtgcggcag
gaaaaaagatcgggcattctggccaatgcgaccatgttgcggcagctcatcaataacctg
gaggctgaaaatgaagggaaggtggttttacctaaattcatgactaaaaactacaaagat
atattcaggatgacgggcctgaaactggtagaaggactggagtatgcttatggcaaattt
ggcattgaaaattcgctggtggtatgcaggtcaaataaatcggctaatgtatacaaccag
cagatcagggcccgattgctgtatcgcgaagaagaacttaccggtggagaccagattatg
gtggtcaggaacaattatttctggctgcccgaaaatgaatcaaccgctttcattgccaat
ggcgatatggccagggttgtgcgggtaagaaggacagaggagcgctacggctttcgtttt
gcggaggttcagcttgaatttctggattttccggatgtgggaacggttacctgtaaggta
atgctggatacacttactgtagaagccccgaatttatcttatgaacaaagtaataagctg
tttgaggaattaaatatagattatgagcatattaaaaataaacgggaacgttttaatgcc
attaaagaagatccatattacaatgcactgcaaattaaatttgcttatgcagtaacctgt
cataaggcacagggcggtcagtgggacgctgtatttgttgatcagggctatttaacggat
gaaatggtagacatggattttttaaggtggctatatacaggtgttacaagggcaaaaaga
gaattatttttagtaaattttgcccctaacctgtttttggcccctgccgaagaccaattt
taa
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