Pedobacter heparinus: Phep_1559
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Entry
Phep_1559 CDS
T00978
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
phe
Pedobacter heparinus
Pathway
phe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Phep_1559
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
phe01007
]
Phep_1559
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phe03016
]
Phep_1559
Enzymes [BR:
phe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Phep_1559
Amino acid related enzymes [BR:
phe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Phep_1559
Transfer RNA biogenesis [BR:
phe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Phep_1559
Prokaryotic type
Other AARSs
Phep_1559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Cdd1
Motif
Other DBs
NCBI-ProteinID:
ACU03772
UniProt:
C6XTY6
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All DBs
Position
complement(1843484..1845205)
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AA seq
573 aa
AA seq
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MSTGLSELEVLRRNSLTQLRELGINPYPAEAFEINAHAADILANYERDKTAYKNISMAGR
IMSRRIMGSASFVELQDSTGRIQVYLKRDDLCPDEDKTLYNTVFKKLLDLGDFIGIKGYV
FTTQTGEISVHVTALTLLSKSLKPLPIVKRDEEGNIYDGFTDPEMRYRQRYVDLTVNPGF
KQIFINRSKVINTMRGYFDNQGWMEVETPILQPIHGGAAARPFATHHNTLDMPLYLRIAN
ELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNPEFTSMEIYVAYKDYIWMMAMVEECLEK
VALAIHGKPVVKVGDYEINFEGPYEKLTMYESIQKYTGIDVSVMTEEEIKTVCKSLGIEI
DNSMGRGKLIDELFSEKVEANLIQPTYITDYPLEMTPLAKKHRSKEGLVERFELFVMGKE
IANAYSELNDPIDQRERFEDQLKLAARGDDEAMAMDDDFIRALEYGMPPTSGLGIGIDRL
VMLMTDQSTIQEVLFFPQMRPEKKVKITTDEDFVNAGVPAEWVQAVRKMGINTIEELKAA
NPNKVFNDLGGMRKKLKLELAMPSKEEVTAWFA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggactatcagaattagaagtattgcgccgtaattcgctaacacaattacgt
gaactgggtatcaatccctatcctgccgaagcatttgagatcaatgcccatgcagcagat
attttagcgaattacgaacgggataaaactgcttataagaacatcagcatggcgggccgc
atcatgagccgcagaattatgggaagtgcttcttttgtggaattacaggactcaaccgga
agaatacaggtttatctgaaaagagatgacctgtgtccggatgaagacaaaactttatac
aataccgtatttaagaaattgctggaccttggtgattttattggtataaaaggttatgtt
tttaccacacaaacgggtgagatctctgttcatgtaacagcacttactttgctttccaag
tctttaaaaccattgcctattgttaaacgtgacgaggaaggaaatatttatgatggtttt
actgatcctgaaatgcgttacaggcagcgttatgtagaccttacggtaaatccgggcttt
aaacagatttttatcaaccgttccaaggtgatcaataccatgcgtggatattttgataat
cagggctggatggaagtggaaacacctattctgcaacccattcatggtggtgctgcagcc
cgtccatttgctacacaccacaatacgctggatatgccattgtacctgcgtattgccaat
gaactttacctgaaaagactgattgtagcaggttttgacggcgtttatgagtttggtaaa
atgttcagaaacgaagggatggaccgtacccataatcctgaatttacctctatggagatt
tatgtagcttataaagactacatctggatgatggccatggtagaagaatgcctggagaaa
gtagctctggcgatccatggaaaacctgtagtaaaagttggggattatgagatcaacttt
gaaggcccatacgaaaaactgaccatgtacgagtctatccagaaatatacaggtatagat
gtttcagttatgacagaagaagagatcaaaacggtttgcaaaagcctgggcatagaaatt
gataattctatgggcaggggcaagctgattgatgaactgttcagcgaaaaagtagaggcg
aacctgatccagccgacttacattaccgattatccgttggaaatgacacctctggctaaa
aaacacagaagcaaggaaggactggtagaacgttttgaattatttgtgatgggtaaagaa
attgccaatgcttactctgagctgaatgaccctattgatcagcgggaacgctttgaagac
cagttaaaacttgctgcaagaggtgatgatgaggcgatggcgatggacgatgattttatc
cgtgccctggaatatggcatgccacctacatcgggtctgggtattggtatagatcgtctg
gtaatgctgatgaccgatcaatcgaccatacaggaagtattgttttttccgcagatgagg
ccggaaaagaaagtcaaaataacaactgatgaggattttgtaaatgccggtgtacctgct
gaatgggtacaggcagtccgcaaaatgggcatcaacaccatagaggaattaaaagcagca
aatccaaataaggtttttaacgatctggggggtatgcgtaaaaaacttaaattggagctg
gccatgccttcaaaagaagaggttacagcctggtttgcttaa
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