Pedobacter heparinus: Phep_1631
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Entry
Phep_1631 CDS
T00978
Name
(GenBank) ABC transporter related
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
phe
Pedobacter heparinus
Pathway
phe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Phep_1631
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_1631
Transporters [BR:
phe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Phep_1631
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_22
AAA_21
NB-ARC
AAA_29
AAA_16
AAA_5
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
ACU03844
UniProt:
C6XUJ4
LinkDB
All DBs
Position
complement(1932111..1933847)
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AA seq
578 aa
AA seq
DB search
MPVNHYLGSQMLNVKNLDIQFLNREDKSWFKAVNKVSFQVEKGKVLGIVGESGSGKSVTS
FSIMRLHDPQSTKIEGNIDFQNINLLGLSPDEIRKYRGNKIAMIFQEPMTSLNPVFTCGY
QVKEAIMLHQRVDKQTAKEKTIALFKEVQLPRPENIFDSYPHQLSGGQKQRVMIAMALSC
NPELLIADEPTTALDVTVQKTILQLLLKLKEERGMAMIFISHDLAVISEIADEVAVMYKG
QIVEQGAAAQLFNHPQHPYTRGLLACRPAPQRLLKKLPVVADFMNGDKEMGLKHLLEMNS
YTQAEIEQRRHNLYQQKPLLQVKQLCTWYPINKGLFGKTTEYVKAVDDITFDVFPGETLG
LVGESGCGKTTLGRSILRLVEPTSGELLFDGTDLSSLDTAGLRKMRRAVQIIFQDPYSSL
NPRLTIGNALMEPLQVHGMFDNNEQRKAHVLNLLDRVDLKPEYFNRYPHEFSGGQRQRIV
IARALALQPRFIICDESVSALDVSVQAQVLNLLRELQQEFGLTYIFISHDLAVVKHISDR
MIVMNKGKIEEQGFPEEIYHNPKAEYTKKLIAAIPGHA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccggtaaatcactaccttggttctcagatgctaaacgttaaaaatctagacatacaa
tttcttaacagagaggacaaatcctggtttaaggccgtaaacaaggtaagcttccaggtt
gaaaaaggaaaagtactgggcatagtcggcgaatcaggctccggtaaatccgtaacttct
ttttctattatgcgacttcatgatcctcaaagtacaaaaattgagggcaacattgatttt
caaaacatcaacctgctcggcctgtcgcccgatgagatcaggaaatacaggggtaataaa
attgccatgatctttcaggaacccatgacttccctgaacccggtttttacctgtggctat
caggttaaagaagccatcatgctgcaccagcgggtagataaacaaactgcaaaagagaaa
accattgccttgtttaaagaagtacagctgcccagaccggaaaatatatttgacagttac
ccgcaccagctttcagggggacaaaaacaaagggtaatgattgccatggctctgagctgc
aaccccgaactgctgattgccgatgagccaactacggcattggatgttaccgtacagaaa
accattttgcaattgctgctgaagctgaaagaagagcgcggaatggccatgatctttatc
tcgcacgacctggcagtgatcagtgagattgcggacgaggtagccgtaatgtacaaagga
caaattgtggaacagggagcggcagcgcagctgtttaaccatccgcaacacccttatacc
aggggcttactggcctgccgccccgcccctcagcgcctgctgaaaaaacttccggtagtg
gccgattttatgaacggcgacaaagaaatgggcctgaagcatttactggaaatgaacagt
tatacacaggccgaaattgaacagcgcaggcataacctttatcagcaaaaacccttgctg
caggtgaaacaattgtgtacctggtatccgataaacaaggggctttttggcaaaacaacg
gaatatgtaaaagctgtggacgacattacttttgatgtgtttccaggcgagaccttagga
ctggttggcgaatccggatgcggaaagaccacgctgggccgtagtattttacgattggtg
gagcccacttcaggcgagctgctgtttgacgggaccgacttatcctcgctggatactgcc
ggattaagaaaaatgagaagagcggtacagatcatctttcaggacccctactcttccctc
aatccgcgtttaaccatcggtaatgcgctgatggaacccttacaggtgcatggcatgttc
gacaacaatgagcagcggaaagcccatgtgctgaatctattggaccgggtagatctgaaa
cctgaatatttcaacaggtatccgcacgaattttcgggcggacagcgccaacgcatagtc
attgcaagggccctggccctacagccccggtttattatatgcgatgaatcggtatcggca
ctggatgtttctgtacaggcccaggtgctcaatctgctcagagaattgcagcaggagttt
gggcttacctatatctttatctcacacgacctggccgtggtaaagcacatctccgacagg
atgattgtgatgaacaaaggcaaaattgaagaacagggctttccggaagaaatttaccat
aaccctaaagctgaatacaccaaaaaactaattgcagctatacccgggcatgcttaa
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