Pedobacter heparinus: Phep_1712
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Entry
Phep_1712 CDS
T00978
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
phe
Pedobacter heparinus
Pathway
phe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Phep_1712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phe03400
]
Phep_1712
DNA repair and recombination proteins [BR:
phe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Phep_1712
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Acetyltransf_1
Motif
Other DBs
NCBI-ProteinID:
ACU03923
UniProt:
C6XUS3
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All DBs
Position
2033581..2034345
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AA seq
254 aa
AA seq
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MRSIWKGSIGFGLVNIPVKLFSGVQNSQLDLDMLDERDHSNIKFKRINEKTQKEVPYDKI
VKGYFLKDRYIVLDEHDFEEVKPEKTKVIEIENFVDITEINPVYYETSYYTQPESQGKKA
YALLLKALEKSKKAGVARFVLRNTENLCVIHPLNGIIVITKIRFQEEIRDPKELQLKDTV
TINPKELQVGLALIKQYTTEFDISAFKNDYSKELLKIIKSKAQGKRATVKKIKTKKAASD
DLYDQLMESLSKRA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgatatggaaaggatcaattggcttcggtctggtcaatatcccggtaaaatta
ttttcaggggtgcaaaatagtcagcttgatctggatatgcttgatgaaagggaccacagt
aacattaaatttaaacggataaacgagaagactcagaaagaagtcccttatgacaaaatt
gttaaaggttattttttgaaagaccgttatatcgtgctggatgagcacgactttgaagag
gtaaaaccagaaaagaccaaagtgatcgagattgaaaattttgtagatataacagagatc
aatccggtttattacgaaacgtcttattatacccagccagaaagtcagggtaaaaaagcc
tatgctttattacttaaggctttagaaaaatctaaaaaagcaggcgtagcacgttttgtg
ttgaggaacacagaaaatttatgtgttattcatccgcttaacggaatcatcgtaatcact
aaaattcgttttcaggaagaaatacgcgatcccaaagaactgcagttgaaggataccgtt
accatcaacccaaaagaactacaggttgggcttgccctgatcaaacaatatactactgaa
tttgacattagtgcttttaaaaacgattattctaaagaactgttaaagatcataaaatca
aaagcccagggcaaaagggcaactgttaaaaagatcaaaactaaaaaagcggcaagtgat
gatttgtatgaccaacttatggagagcttaagcaaaagagcttaa
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