Pedobacter heparinus: Phep_1866
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Entry
Phep_1866 CDS
T00978
Name
(GenBank) beta-lactamase domain protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phe03016
]
Phep_1866
Enzymes [BR:
phe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Phep_1866
Transfer RNA biogenesis [BR:
phe03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Phep_1866
Prokaryotic type
Phep_1866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
LD_SV2
Phage_CP76
Motif
Other DBs
NCBI-ProteinID:
ACU04074
UniProt:
C6XVZ5
LinkDB
All DBs
Position
2156009..2156920
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AA seq
303 aa
AA seq
DB search
MKFEVTILGSSSATPVYNRNPTAQLLNCNEKFYLIDCGEGTQQQLIRFGFKANKIDFVFI
SHLHGDHYFGLIGLLSSLHLNGRIKPIKIFAPAALAEILELQFKHSETVIRYPVEFVATQ
TDAPAEIFENADLKVETIILNHRIPCTGFKFVQKKRLRKLIVEKLEAEEIPVDCYPLLKR
GADLDLPDGRVLLNADYTTDSDRPKQYCYCSDTLFDETYFESIQGCDTLYHEATFLHEMV
DRANQTHHTTALQAAEIAKMTGAAKLLIGHFSSRYKTLQPLLEEARSVFENTELAIEGNT
YTI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaggtcactattttaggcagtagttctgcaacacctgtatacaatagaaat
ccgacagcccagcttttaaattgcaacgaaaagttctatctgatcgattgcggggaagga
actcagcaacaactgatcagatttggatttaaagccaataagatagattttgttttcatc
agccatttgcatggcgatcattattttggattgattggattgctttccagcttgcattta
aacggacggattaagcccatcaaaatatttgctccggcagctctggctgaaatactcgag
ctgcagtttaaacattcggaaacggtgatcaggtatccggttgagttcgtggccacacag
acagatgcgccggcagagatttttgaaaatgcggacctaaaggtagaaaccattattcta
aaccacaggattccctgtacaggctttaaatttgtacaaaagaaaaggctgagaaaattg
attgttgaaaagctggaagctgaagaaattcctgttgattgttatcccttgctgaaaaga
ggggctgaccttgatctgcctgatggcagggttttattgaatgcagattatacaacagat
tctgaccgccctaagcaatattgctattgttctgatacgctgttcgacgaaacttatttt
gaaagtatacagggttgtgataccctgtaccatgaagccacttttttacacgaaatggta
gacagggcaaaccagacacaccataccaccgcattacaggccgctgagattgcgaaaatg
accggagcagctaaattgcttatcggacatttttcttccaggtacaagactttacagcca
ctgctggaggaagccagatccgtatttgaaaatactgaactggcgattgaaggaaatacc
tatacgatttag
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