Pedobacter heparinus: Phep_2044
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Entry
Phep_2044 CDS
T00978
Name
(GenBank) DNA topoisomerase type IA central domain protein
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phe03032
]
Phep_2044
Enzymes [BR:
phe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Phep_2044
DNA replication proteins [BR:
phe03032
]
Prokaryotic type
DNA Topoisomerases
Phep_2044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Mac-1
Motif
Other DBs
NCBI-ProteinID:
ACU04249
UniProt:
C6XWV5
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All DBs
Position
2360936..2362762
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AA seq
608 aa
AA seq
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MKIVIAEKPSVGRELAKVFGATTKKDGYIEGKGYSFTWAFGHLLQLAPPQEYGFIGWRRQ
HLPMLPKKFKLAIRKIKTKDGMVEDPGVRKQLDIIKKLFDEATEIIVATDAGREGELIFR
YIYYFLKCKKPFRRLWISSQTDEAIKEGFRNLKPGTDYDTLFNSAHCRSESDWLVGMNAT
QALSISAGNRSVLSLGRVQTPTLAMICSRFLEIKNFVPQTYYQLAIQLDKDGQLFRAMSV
SNFDKKEEAEELLAKIEDVASGFSNGGKILSVEAKPRKEPPPLLHDLSSLQQEANKRKGF
TADQTLSLLQGLYESKLVTYPRTGSRYIGDDIFAGVPALIDKVRGHKDFGKQAEFLLTVP
LNKRSVNAKKVTDHHAILPTGESPYQLNGDKQAVYDMVVGRMIEAFHQECVKEITKISVE
SGSLFIANGTVIRAAGWRSVFNESDEEKKDEDNPALPKLKKGEELPVTNKALLEKQTKPK
AMYNEASLLKALETSGKDIEDEELRYAMKDSGLGTPATRAAIIETLISREYVSREKRNLV
PTTKGLAVYDVVKDQKIAQAELTGQWEKRLEEIRSGASVSDFKAEIADYTKTITNELLAA
GLTLAEKI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgttattgcagagaaaccttccgtgggacgtgaattggcaaaggtttttggt
gctacaactaaaaaggatggatatattgaagggaaaggttattcttttacctgggcattt
ggccatttattacaactggccccgccgcaggaatatggttttataggttggcgaagacag
catttgcctatgctgcccaagaaatttaaactggctatccgtaaaatcaaaaccaaggac
ggcatggttgaagatccgggtgtgcggaagcagctggatatcattaaaaagttatttgat
gaagctacagagatcattgtggcaacggatgccgggcgtgaaggtgaactcattttccgc
tatatttattatttcctgaaatgcaagaagccttttagaaggctctggatttcatcgcag
accgatgaagccataaaagaggggttcaggaacttaaagccgggtacagattacgatacc
ctgttcaattctgcacactgcaggtctgaatctgactggctggtagggatgaacgccaca
caggctttaagtatctcggcaggaaaccgttcggtattgtcgctgggcagggtacagaca
cctacactggccatgatctgctcccgttttctggagatcaaaaattttgtcccccaaact
tattatcagctggccatacagctggataaggacggacagctgttcagggccatgtcggtc
agcaattttgataaaaaggaagaagcagaggaactgctggctaaaattgaagacgtggcc
tcgggttttagtaatggagggaagattttaagtgtggaagccaagccgcgtaaggaacca
ccaccattgctgcatgacctgagcagtttgcagcaggaggccaataagcgcaagggcttt
acggcagaccagaccttaagtttgctccagggtctttacgaaagcaagctggttacttac
ccgcgtacgggcagccggtatatcggcgatgatatatttgcgggtgtgcctgctttgatc
gataaggtaaggggccataaagattttggaaagcaggcagagtttctgcttacggttcct
ttaaacaagcgcagtgtaaatgcgaaaaaggtaaccgaccaccatgccattttacctaca
ggcgagtccccttatcagttaaatggtgataaacaagctgtttatgatatggtagttgga
cggatgattgaggcttttcatcaggaatgtgtaaaagagatcactaagatatctgtcgaa
tccggttctttatttattgccaatggcacggtgatccgtgctgcgggctggcggtcggta
tttaatgaatcggatgaggagaagaaggatgaggataacccggcattgcctaagttgaaa
aaaggagaggagcttccggttaccaataaggcgttgctggaaaagcaaaccaaacctaaa
gcaatgtacaatgaggcttctttgttaaaagcactggaaacttcgggtaaggacattgaa
gatgaggaattgaggtacgccatgaaggatagcggattgggtacaccagctacgcgtgcg
gccatcatcgaaacgctcattagccgtgaatacgtttccagggaaaagcggaacctggtg
cccacaactaaaggactggcagtttatgatgtggtaaaagaccagaaaattgcccaggct
gaactgaccggacaatgggaaaaaaggctggaagagatcaggtctggtgcttctgtaagt
gattttaaagccgaaatagccgattacaccaaaaccattaccaatgaattgcttgcagcg
ggcttaacactggcagaaaaaatataa
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