Pedobacter heparinus: Phep_2060
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Entry
Phep_2060 CDS
T00978
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
phe
Pedobacter heparinus
Pathway
phe03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Phep_2060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phe03032
]
Phep_2060
Enzymes [BR:
phe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Phep_2060
DNA replication proteins [BR:
phe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Phep_2060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
divDNAB
DnaGprimase_HBD
Sec20
Motif
Other DBs
NCBI-ProteinID:
ACU04265
UniProt:
C6XWX1
LinkDB
All DBs
Position
complement(2376269..2377837)
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AA seq
522 aa
AA seq
DB search
MSNDQPQGQDKANFSARKTRLSNTMSTMGRIPPQAIDLEEAILGALMLEKDALSTVIDIL
KPEMFYHEAHKKIFEAIQGLFQKSKPVDILTVTAELRTLGLLEMIGGAYYITNLTNRVAS
AANIEFHARIVSQKYIQRELIRISSEIIQNAYEDTTDIFDLLDHAEKNLFDIAQNNLRRD
TQKMDEIVKQSLATLEELRSKSDGLTGVPSGFTDLDRITGGWQASDLVIIAARPAMGKTA
FVLTCARNAAVQFKRPAVVFSLEMSSVQLVNRLISGEAEIEQEKIRKGNLAEWEWQQLHS
KIGGLTEAPLLIDDTPALNIFEFRAKCRRLKAQYDIQLIIIDYLQLMHGKGEGQSGGGNR
EQEIGSISRALKSVAKELNVPVLALSQLSRAVESRPGVNGKRPMLSDLRESGSIEQDADM
VLFLYRPEYYGITEDEQGRSQAGVGEVIIAKHRNGETGIVPLRFIGKYVKFADLEESFAA
PTSFSMDSPSAGMAPSQDFDRPAGNVIIKPSRMDDMHDDAPF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgatcaaccccaaggacaagataaggcaaatttcagtgcaaggaaaaccagg
ttaagcaataccatgagcactatgggtaggataccaccccaggccattgatcttgaagaa
gccattttaggcgcgctgatgctcgaaaaagatgctttatcgactgttattgatatcctt
aagcccgaaatgttttaccacgaagcacacaaaaagatcttcgaggccatacaggggctt
ttccagaaatcaaaaccggttgatatccttactgttaccgctgaactccgtacattggga
ctactggaaatgattggcggggcttattacattactaacctgaccaacagggtggcttca
gcagccaacatagaatttcatgccaggatcgtttcccagaaatacatccagcgcgagctg
atcaggatttcttcagagatcatacaaaacgcctatgaagatacgacggatatttttgac
ctcctggatcatgcagaaaagaacctgtttgacattgcccagaacaacctgcgccgggac
acacaaaagatggacgagattgtaaaacaatctctggccacgctggaagagctacgcagc
aaaagtgatggtttaacaggcgtaccttccggatttaccgatctggaccgcattacaggt
ggctggcaggcatccgatctggtcatcattgcggcacgtccggccatgggtaaaacggca
tttgtattaacctgcgccagaaatgcagccgttcagtttaaacgtccggcagttgtattc
tctttagagatgtcttccgtacagttggttaaccgtctgatttccggagaagctgaaatt
gaacaggaaaagatcagaaaggggaaccttgccgaatgggaatggcagcaactgcacagt
aagatcggcgggcttaccgaagcgccactgctgatagatgataccccggccttaaatatc
tttgaattcagggccaaatgcagaagattaaaggcccagtacgatatacagctcatcatt
atcgactatttacagctgatgcatggcaaaggtgaaggtcagagtggtggtggtaaccgt
gagcaggaaattggcagcatttcaagggcacttaaatcggtggccaaggaattaaatgta
cctgtgctcgccctctcgcagctgagccgtgcggtagaaagcagaccaggtgtaaacgga
aaacggccaatgttatccgatttacgtgaatccggatctattgagcaggatgcggatatg
gtgctcttcctttaccgaccggaatattacggcatcaccgaagatgaacagggccgatct
caggccggtgtgggtgaagtcatcattgccaagcaccgtaatggtgaaaccggtattgta
ccgctccgctttatcggcaagtacgtgaaatttgcagatctggaagaaagttttgcagcc
cctacctcgttttctatggacagtccgagtgccggaatggctccatcgcaggattttgac
agacctgccggaaatgtcatcattaaaccatcacgaatggacgatatgcacgacgatgcc
cctttttaa
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