Pedobacter heparinus: Phep_2065
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Entry
Phep_2065 CDS
T00978
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
phe
Pedobacter heparinus
Pathway
phe00541
Biosynthesis of various nucleotide sugars
phe01100
Metabolic pathways
phe01250
Biosynthesis of nucleotide sugars
Module
phe_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Phep_2065
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
phe01005
]
Phep_2065
Enzymes [BR:
phe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Phep_2065
Lipopolysaccharide biosynthesis proteins [BR:
phe01005
]
Lipid A
Phep_2065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Crystall_2
Motif
Other DBs
NCBI-ProteinID:
ACU04270
UniProt:
C6XWX6
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All DBs
Position
2383201..2384016
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AA seq
271 aa
AA seq
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MINFSLDKLKHTASGNFFLMAGPCAIEGEEIALRIAEKIVNITDKLEIPFIFKGSYRKAN
RSKGGSFTGIGDEKALKILEKVGKTFNVPTVTDIHESAEAAMAAAYVDVLQIPAFLCRQT
DLLIAAALTGKVVNVKKGQFLSAGSMKFAVEKIVESGNNRVVLTDRGNTFGYQDLIVDYR
GLPEMQGFGVPVVMDCTHSLQQPNQSSGVTGGKPELIETIAKAAIAVGADGLFIETHPDP
ANAKSDGANMLQLDLLEDLLVKLVRIRKAVI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacttttcattagataaattaaaacatacagcttcgggtaacttctttttaatg
gcaggcccatgcgctatagagggtgaggaaattgctttgcgcattgccgagaaaattgta
aatattaccgataaacttgaaatcccctttatttttaaaggctcttatcgcaaggccaac
cgttccaagggtggttcttttaccggtattggcgacgaaaaagcacttaaaatactggaa
aaagtaggcaaaacctttaatgtacccacagttacagatatccacgaaagtgctgaagct
gctatggcagctgcttatgtagatgtgttacagatccctgcttttttatgccggcaaaca
gacctgctgattgctgctgcgctgacaggtaaagtggtcaatgtaaaaaaaggacaattt
ctatctgcgggatcaatgaagtttgccgttgaaaagattgtagaatctggcaacaacagg
gtagtgctcaccgacaggggcaatacctttgggtaccaggatctgattgtagattaccgt
ggactacccgaaatgcagggttttggtgtgccggtggtgatggattgtacacattcctta
caacagcccaatcagagttccggggtcaccggtggtaagcccgaactgattgaaacaatt
gcaaaagcagcaattgctgttggtgcagatggtctgtttattgaaacacatcccgatcct
gcaaatgccaaatcggatggtgcaaatatgctgcagctcgatttactggaagatttgctg
gtcaaacttgtcaggatacgaaaagcagtgatttaa
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