Pedobacter heparinus: Phep_2080
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Entry
Phep_2080 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2080
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_2080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
GlnD_UR_UTase
Motif
Other DBs
NCBI-ProteinID:
ACU04285
UniProt:
C6XWZ1
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All DBs
Position
2398918..2400291
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AA seq
457 aa
AA seq
DB search
MKLIKYIIFSFLLSTLSSCEKFLTTEPVNAVSDENPIYDKGSSETALRAVYRQMGNIGYY
GETYVTFGYFPSGDIKNLTTGGSANLVNVNFRTDEVFFNTAWIAIYNTINRANQVISKVP
GVNDPLLTPALKNQYIGEAKFIRALAYFDLARAWGGVQLILEPTISLENRPKVKRSTLAE
TYAQVQKDLEDAEVLLPDVVNRIRATRRTVWALRARLHLYKQEWALAEEYATRLIDKTAD
YTLVKPFSAWFANNVTASRESIFELQYSVINPNAIRIQMQHSTNGGQYRYAPNDRFVQLL
NDPAVSGGRSALIGSVTQSGITNWFGNLYYRKDATDPTYIFRIAEMYLIRAEARAQLNNL
SATSGALSDLNQVRDRAGILPSTAAGKDQILLAIENERRIEFAWEAHRWFDLARTGRAKV
VLEALDPNTKVSAHEYVFPIPVTQIQLDPNLEQNKDY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttataaaatacatcatcttctcatttttactgagcaccctcagctcctgcgag
aagtttttaactacagaacccgtaaatgcggtatcggatgaaaacccgatctacgataaa
ggatcaagcgaaactgccttaagggctgtttacagacaaatgggcaatatcggttattat
ggcgaaacctatgtaacttttggctatttccccagtggggacattaaaaacctgaccaca
ggtggttctgccaacctggtcaatgtaaatttcagaacggatgaggtgtttttcaacacg
gcctggattgccatttacaacaccattaaccgggccaaccaggtaatcagtaaagtgccg
ggcgtaaacgatcctttattgacaccggcacttaaaaaccaatacattggcgaggctaaa
ttcataagggcactggcgtattttgacctggccagggcctggggtggtgttcagctgatc
ctggaacctacaatatcactggaaaaccggcccaaagtgaaaagaagtacactagccgag
acctatgcgcaggtacagaaagacctggaagatgctgaagtactgctgcctgatgttgta
aaccgaatcagggctaccaggcgtaccgtttgggccctaagggccagactgcacctttat
aagcaggaatgggcactggccgaagaatatgccaccaggttaatcgataaaacagccgat
tatacgctggtaaaaccttttagtgcctggtttgcgaataatgtaacagccagcagggaa
tccattttcgaattgcagtacagtgtgatcaatccaaatgccatccgtatccagatgcag
cactctaccaatggagggcagtaccgctacgcaccgaacgacaggtttgtacagctgctg
aatgatcctgccgtatcgggtggaaggagtgcccttatcggtagtgttacacaaagtggc
atcaccaattggtttggcaatttgtattacaggaaagacgctacagatcccacctacatt
ttcaggattgcagagatgtatctcatccgcgcagaagcaagggcccagctcaataatcta
tcggccaccagcggagcgctgtccgatctgaaccaggtgcgtgaccgtgcaggtatttta
ccttcaacggcagcaggaaaagaccagatcttactggctatagaaaatgaacgccgtata
gaatttgcctgggaagcacaccgttggttcgacctggcaagaaccggtcgtgccaaagtg
gtgctcgaagcattggatcccaataccaaggtgtcagcgcacgaatatgttttcccgata
ccggtaacacagatccagctggatccaaacctggaacaaaacaaagattattaa
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