Pedobacter heparinus: Phep_2199
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Entry
Phep_2199 CDS
T00978
Name
(GenBank) Exodeoxyribonuclease VII
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
phe
Pedobacter heparinus
Pathway
phe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Phep_2199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phe03400
]
Phep_2199
Enzymes [BR:
phe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Phep_2199
DNA repair and recombination proteins [BR:
phe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Phep_2199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
RNase_II_C_S1
VWA_3
Motif
Other DBs
NCBI-ProteinID:
ACU04403
UniProt:
C6XXY5
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All DBs
Position
complement(2529389..2530783)
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AA seq
464 aa
AA seq
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MEVHSYPSNPAAIRLSELATQIRQAIDGVFGNRTFWVIADISSHTYKSQTNYHYFELVEK
DKGSAKILSKIAGRAWGNASVNISNFEQATGQKFQNDINVLVQVAVQYNPAFGLQLNLLD
IDTSFTLGLFEQQRKETLARLLRENPDFIQKAGEQYFTRNGSLALNRVLQRIAVISSATS
AGYQDFKHTLENNTFGYRFIIDDYFTPVQGEANARQFLAKIVEVFQSGKPYDTLVIIRGG
GAQTDFLIFDNYELSRAIAKFPVPVITGIGHQKNETIADLMAHTATKTPTKAAELIIAHN
RAFEENLLGMQKMMLIKTYQLINYHKDRLAQLNQTTISTSRGLLHEQQLHIISLSRMVLG
NPRIILSNRQKDLSNLIGNMQSYNRMYFANKRGYIGHFQSVVRLMSPQNILNKGFAILKV
KGKIAGNAEDIEAGTELTVRLAATEIKTTVITKSAIDGNDEFNL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaagttcactcgtatccatctaaccctgcagccatcaggctctctgaactggccaca
cagatcagacaggccatagatggggtattcggcaaccgtaccttctgggttattgccgat
ataagcagccatacctataaatcccaaaccaattaccattattttgaactggtagagaaa
gacaaaggttctgcaaagatcctcagcaaaatagccggcagggcctggggaaatgcatcg
gttaacatttccaattttgaacaggcaaccggacaaaagttccagaacgacatcaatgtg
ctggtacaggtagctgtgcagtacaacccggcattcggcctgcagttaaacctgcttgat
atagataccagctttaccctgggcctttttgaacagcagcgcaaagaaaccctggcccgc
ctgctccgggaaaatccggattttatacaaaaagcaggtgaacagtatttcacccgcaat
ggcagcctggccctaaaccgggtactccagcgcatagctgtcatttcttcggccacttct
gcgggttatcaggattttaaacatacactggaaaacaatacctttggctaccgttttata
atagatgattattttacgccggtgcagggcgaagccaatgccagacagttcctggctaaa
attgtagaggtattccagtcgggcaaaccttatgataccctggtcatcatcaggggcgga
ggggcacagaccgactttctcatcttcgacaattacgagctcagccgggccatcgccaaa
ttccctgtaccggtaattacaggtatcgggcaccagaaaaatgagaccattgccgattta
atggcacatacggcaacaaaaacgcccacaaaagcagccgaactgatcattgcacacaac
agggcctttgaagaaaacctgctgggcatgcaaaaaatgatgctcattaaaacctatcag
ctcatcaattaccataaggaccggctcgcacaactcaaccaaaccaccatcagtaccagc
aggggcctgctgcatgagcagcagctccacatcatcagcctctcgcggatggtacttggc
aaccccaggatcatcctttccaaccggcaaaaagacctcagcaacctcatcggcaatatg
caatcctacaaccggatgtattttgccaataaaagagggtatatcggtcattttcagtcg
gtagtgcgactcatgagtccccagaacatcttaaacaagggttttgccatccttaaagta
aagggcaaaatcgccggcaatgccgaagatattgaggcaggcaccgaacttaccgtacgc
ctggcggctacagaaattaaaactacagtaattaccaaatcagcaatagatggaaacgac
gaatttaacctatga
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