Pedobacter heparinus: Phep_2220
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Entry
Phep_2220 CDS
T00978
Name
(GenBank) hypothetical protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2220
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_2220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACU04424
UniProt:
C6XY06
LinkDB
All DBs
Position
complement(2561525..2563057)
Genome browser
AA seq
510 aa
AA seq
DB search
MKALNNIKYGLLLLIFLGTGCTKFLDVERPDNLIKDNFWQNRDQVYSSLIGLYTAMNSCV
SSFQVWGDSRSSLYAPGIGTEFTSNHAQFLSHDIYTTNSLTSWASVYKAIGWTNAFIKNA
PEGPKNDPTFKVEELQQMMGEAYALRGLFYFYLVRTFKEVPVIKEPYESDAQTFNTAASS
ENEVLDFIEEDLGNALKIAPETFTDAKERHGRITKNAIRAILADVKLWRNQYAACIDLCK
TIDVAYANSLVRPLDWYTIFYPGNSTESIFEFQYGLQGPSSPLYNWFSFHDQGKEIYLAN
SKNITANSGEFLYPSTVPEHITSDTIRLKPYSAFSMTSAANGYASATEVYKFLGQAPYQV
AYRRQNDRTSNYIFYRYREILLMKAEAYAMLGQYGEAEKNINIIRKHCDIPELTPGEGGE
GAEFFTRLLLEREFELGFEGKEWFAAVRVARRTGYADVLLEKAANNHSMKLAYQVVRARL
LNPESWFLPYYRTEVENNPLLVQKEFYRNK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattaaataacataaaatacggattgctgctcctgatcttcctgggcactggc
tgtactaaatttttagatgtggaaagaccggataacctgatcaaagataatttctggcaa
aacagggaccaggtatattcttctttaatcgggctgtatacagccatgaacagctgtgta
agttcattccaggtatggggggatagccggtctagtctatatgcgcccggaataggtacc
gaatttaccagtaaccatgcgcaattcctttcgcacgatatttataccacaaatagtctt
acctcatgggcctctgtatataaagcaattggctggaccaatgcttttatcaaaaatgcc
cctgaaggccctaaaaatgaccccacttttaaagtagaagagctacaacaaatgatgggc
gaagcttatgcccttcgtggtttattctacttttacctggtccgtacttttaaagaagta
cctgtgatcaaagaaccttatgaatcagatgcacaaaccttcaatacagccgcttcatct
gaaaacgaggtgcttgattttatagaggaagaccttggcaatgccctgaaaattgcgcct
gaaacatttaccgatgcaaaggaacgccatggcaggatcactaaaaatgccatcagggca
atactggccgatgtcaaactctggagaaatcaatatgcagcctgtatcgatctgtgcaaa
accattgatgtagcatacgcaaattctttggtaaggccgctcgactggtataccattttt
tatcccggcaattctactgaatccatcttcgaattccagtatggccttcaggggccatcc
tcaccattgtacaactggttctcttttcatgatcagggcaaggagatctacctggccaat
tcaaagaacatcactgcaaattctggtgaatttctgtatccaagtacagtacccgaacat
atcacttctgataccatacggttaaaaccctatagtgcctttagcatgacatccgcagca
aatggctatgcctcagcaactgaggtatataaatttctggggcaggcaccttaccaggtg
gcttacaggagacaaaacgaccgtacctccaattacattttttaccgctaccgcgaaatc
ctgctgatgaaggccgaagcttatgccatgctcggccagtacggcgaggccgaaaagaac
atcaatatcatccgtaagcattgcgatataccggaacttacgcctggtgaaggcggtgag
ggggccgaattttttaccaggcttttgctggaaagggaatttgagctcgggtttgaaggg
aaagaatggtttgccgctgtaagggtagccagaagaacaggatatgctgatgttttgctg
gaaaaagcagcaaacaaccattctatgaaactggcttaccaggtagtaagggccaggtta
ctgaacccggaaagctggtttttgccctattacagaacagaagttgaaaacaacccatta
ctggtacaaaaagaattttacaggaacaaataa
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