Pedobacter heparinus: Phep_2298
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Entry
Phep_2298 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2298
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_2298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACU04502
UniProt:
C6XYM0
LinkDB
All DBs
Position
complement(2669478..2671367)
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AA seq
629 aa
AA seq
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MKKFNINLIIVVLVSINCSCKKYLDVVPDNIATIDNSFTLRSKAEQYLFTCYSYLPTDGN
RSTNAAMYGADEVWHYGTGQVIAKGNQSVSSPQNNYWEGTNSAKPLFEGIRTCNIFLDNV
GKVEGLDNYERDRWIAEAKFLKAYYHFYLLRMYGPIPVIRENIPVNASLDELTPPREPID
VCVAYIVQLLDESLEFLPSKIQAENTELGRITQAINLAVKAKVLVMAASPLFNGNIEYSN
FKNAQGIPFFNQTYDPQKWKIAADACKKAIDLCHTNGNKLYYYKDNDPNALLVSPETNLK
MNIRNAIASKWNSETVWANPNSRTADLQIYSQPRLDGNAPGQSSLAGELAPTLKMAELFY
SKNGVPISEDVTYDYNGRFNLRNAVNAERFYIKEGYQTVGLHFDREARFYADLGFDGGIW
YGQGIITDVNNWYVQAKLGQPAGKNSAGKYSTTGYWPQKLVNPNSVYSATANYQVVDYPW
PQIRLADLYLLYAEALNEAVGPDAPDVLTYIDLVRKRAGLPGVVESWSTYSNNPVKFTTK
VGMRAIIHRERAIEMAFEGHRFWDLRRWKEAPQVLNAPIQGWDITQAEAVTYYRVLTLFS
QTFRSRDYFFPISELELTINKKLIQNPGW
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttaatattaatttgataattgtggtactcgtttcgatcaattgttcctgc
aaaaaatatttggacgtagtgccagacaatattgcgacaatcgataattcatttacactg
cggtcaaaagccgaacaatacttattcacctgctactcctacctcccaacagacggtaac
aggtctaccaatgctgcaatgtatggggccgatgaagtttggcactacggcacaggtcaa
gttattgccaaaggaaatcaaagcgtttccagccctcagaataactattgggagggcaca
aattctgctaagcctctatttgaaggaattagaacctgtaacatctttctagacaatgtg
ggcaaagtagagggccttgacaactatgagcgtgatagatggatagctgaagccaaattt
ctgaaagcttactatcatttctatcttttaagaatgtatgggccaattcctgttataaga
gaaaacatacctgtaaatgctagcttggacgaactgacgcctccaagagaaccaatagat
gtctgcgtggcttacatagtgcagttattagatgaatctttagagttcctgcccagtaaa
attcaggcagaaaataccgagttaggacgaataacccaagcaatcaaccttgctgtaaaa
gcaaaagttttggtaatggctgcgagtcctctttttaatggcaatattgaatattcaaac
tttaaaaatgctcaaggaataccatttttcaaccaaacctacgatcctcaaaaatggaaa
atagcagccgacgcttgtaaaaaagcaattgatttatgtcataccaacggcaataaatta
tattactataaagataatgatccgaatgcgttactggtttctccagagaccaatttgaag
atgaacatcagaaatgcaattgcttctaagtggaattccgaaacagtctgggcaaatcct
aatagtcgtactgccgatttgcaaatttattcccagccacgtttggatggtaatgctcca
ggtcaatcttctttggccggcgagcttgcgccgaccttgaagatggccgaattattttac
tccaagaatggcgttcccatttccgaagatgtaacttacgattacaatggccgctttaat
ctgagaaatgcagttaatgctgaacggttttacattaaggagggataccaaactgttgga
ctacattttgacagggaagccaggttttatgctgatttaggctttgacggcggcatctgg
tatggacagggaattattaccgatgtgaataattggtatgtgcaagccaaacttggtcag
ccggccggcaaaaattctgctggcaagtattctactactggctattggccacaaaaatta
gtaaatcctaatagcgtgtactctgcaaccgcaaactatcaagtagtagactacccatgg
ccgcagataaggctcgcagacttgtacttattatatgccgaggcactaaatgaagcagtg
ggaccagacgcgccagatgtattgacttatatagatctagtcagaaaaagagcgggtctt
ccaggggttgtagaatcctggagtacatattccaacaatccagttaagtttacaactaaa
gttggaatgagagcaattattcaccgagaaagagcaattgaaatggcatttgagggacat
cggttttgggatcttaggagatggaaagaggccccccaggttttaaatgcccctattcag
ggatgggacatcacccaggcggaagccgttacctattatcgggtgttaactttattttca
caaacttttagatcgagagactatttctttcctataagcgaattggagcttaccatcaac
aaaaaactgattcaaaatccaggttggtaa
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