Pedobacter heparinus: Phep_2466
Help
Entry
Phep_2466 CDS
T00978
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
phe
Pedobacter heparinus
Pathway
phe00730
Thiamine metabolism
phe01100
Metabolic pathways
phe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Phep_2466
Enzymes [BR:
phe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Phep_2466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACU04670
UniProt:
C6XZH4
LinkDB
All DBs
Position
2860505..2862388
Genome browser
AA seq
627 aa
AA seq
DB search
MKVEKTPGEQVISRTPFPASRKVYVKGQLHDIEVAMREITLSDTKIHNGFGLTEPNPAVT
VYDTSGPYTDPDAHIDVKKGLPRLREKWITGRKDVVQLPEISSDYGQERLADNKLDVLRF
SHLNKPYKAVKGANVSQMHYAKKGIITAEMEYIAIRENQRIDLLNEQLGVQFEVMGHQHK
GHSFGANTPKGYITPEFVRAEVAAGRAVIPCNINHPELEPMIIGRNFLVKINANIGNSAV
TSSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNG
KAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRITGIVSRGGSIMAKWCLA
HHKENFLYTHFEEICEIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKIAWK
HDVQTIIEGPGHVPMHLIKENMEKQLEHCSEAPFYTLGPLTTDIAPGYDHITSAIGAAMI
GWFGTAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARF
EFRWDDQFNLSLDPDTAREFHDETLPADGAKIAHFCSMCGPNFCSMKITQDVRKYASEQG
VDEQEALEKGMAAKSKEFTEKGSEIYL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagaaaaaacacctggcgaacaggtaatcagtcgcactccttttccggcatcc
cgtaaggtatacgtgaaaggccagctgcatgacattgaagtggccatgcgcgagattact
ttgagcgacaccaaaatccacaatggttttggcttaaccgagcccaacccggcagttaca
gtttatgatacgagcgggccttataccgatcctgatgcccatattgatgtaaaaaaaggc
ctgccccgattaagggaaaaatggattaccggcagaaaagatgtggtgcagctgccggag
atcagttctgattacggacaggagcgcctggccgacaataaactggatgttttgcggttt
tcgcacctgaacaagccctataaagcagtaaaaggcgccaatgtatcgcaaatgcattat
gccaaaaaaggtatcattaccgccgaaatggaatacattgccatccgcgagaaccagcgc
atagacttgctgaacgaacagctgggtgtgcagtttgaagtgatgggccatcagcataaa
ggtcatagttttggcgccaatacgcctaagggctatattacacccgaatttgtgcgtgca
gaagtggctgcaggccgggcggtcattccctgtaacatcaaccaccccgagctggagccg
atgatcattggccgcaatttcctggtgaagatcaatgccaatatcggcaactcagccgtt
acatcctcaattgaggaagaagtggaaaaagccgtgtgggcctgcaggtggggtgccgat
acgattatggacctttcgacgggtaaaaacatccatgaaacccgggaatggatcatccgc
aactcccctgttccgattggtacggtgccgatttaccaggccctggaaaaggtgaacggt
aaggctgaagatttaacctgggagctgttcagggataccctgattgagcaagccgaacag
ggggtagattattttaccatccatgcgggtgtgctgttgcggtatgtgcctttaacggcc
aaaaggataacgggtattgtttcccgtggcggttccattatggccaaatggtgcctggcg
catcataaagagaatttcctgtatacccattttgaagaaatctgtgagatcatgaaggct
tatgatgtggctttctcgctgggcgatggcttaaggccgggctgtattgccgatgccaat
gatgccgcccagtttggcgagctggaaactttgggcgagctgactaaaattgcctggaaa
catgatgtgcagaccattattgaggggccgggccatgtgcccatgcacctgatcaaggaa
aatatggagaaacagctggaacactgctcggaagcacccttttacaccctggggccgctg
actaccgatattgcgcctggatatgaccacatcacttcggccattggtgccgccatgatc
ggttggtttggtacagcaatgctctgttatgtaacacctaaggagcatttgggcctgccc
aataaaaaggatgtaaaagatggtgtgattacctataagattgcggcccatgctgccgat
ctggccaaagggcatcccggggcgcagtaccgcgacaatgccctgagcaaagcgcgcttt
gaattcaggtgggatgaccagtttaacctgtcgctcgacccggatacggccagggagttc
catgatgaaacactacctgcagatggggccaagatcgcccatttctgttcgatgtgcgga
cccaatttctgctcgatgaaaattacgcaggatgtgcggaagtacgcatcggaacagggt
gtggatgagcaggaagctttggaaaaaggtatggcagctaaatctaaagagtttactgag
aaaggaagtgaaatctatctgtaa
DBGET
integrated database retrieval system
