Pedobacter heparinus: Phep_2519
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Entry
Phep_2519 CDS
T00978
Name
(GenBank) sigma-54 factor interaction domain-containing protein
Organism
phe
Pedobacter heparinus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA
AAA_3
HTH_8
Mg_chelatase
FleQ
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACU04723
UniProt:
C6XZM7
LinkDB
All DBs
Position
2922018..2923424
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AA seq
468 aa
AA seq
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MAKLLIIDDERAIRSTLREILEYENYEVEDIDNGIDGLELIKKKKFDLVLCDIKMNKMDG
MEVLEQALAYSPDLPFIMISGHGTVETAIEASKKGAFDFISKPPDLNRLLITVRNALDRG
NLVTETKVLKRKVSKTRDILGSSENIGKIKETIERVAPTEARVLITGANGSGKELVARWL
HEKSQRAESPLIEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFELANGGTLFLDEI
GDMSLSAQAKVLRALQEHKITRVGGEKELEVNVRVLAATNKDLLKEIEAGNFRMDLYHRL
NVINIHVPHLTERTEDIPEIALNFLEEICRDYGMPVKKISDGAMTALQALPWTGNVRELH
NMIERLIILSDKVITENDVIAFANPGGGTNIGAVNTANGQSGLAHGPTVDYDKFNNFQDY
KDHAEREFIKFKLEKNNWNVSKTADDIEIQRSHLYSKIEKFGLKRVAE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattattaataattgatgatgaaagggcaataagaagtacgctccgtgagatt
ttagaatacgagaattacgaggttgaagatattgacaatggtattgacggactggaactg
atcaaaaaaaagaaatttgatcttgtactgtgcgacattaaaatgaataaaatggatggt
atggaagtactggaacaggccctggcctatagtccggatcttcctttcatcatgatatct
ggccatggtactgtagaaaccgccatagaagccagcaaaaaaggggcgtttgattttata
tctaaaccacccgatctgaacagattgttgattacagtcagaaatgccctggacaggggt
aatctggttactgaaactaaggtattaaaaagaaaagtaagcaagaccagggacatcctg
ggcagttcagaaaatattggaaaaattaaagaaaccattgaacgtgttgcgcctactgaa
gccagggtattgattacaggtgcaaatggtagtggtaaagagttggtggcacgctggctg
cacgagaaatcgcaacgtgcagaaagtccgcttatagaagtaaactgtgctgcaatcccg
tcggaactgatagaaagtgaactatttggtcatgaaaagggttcatttacctctgcagta
aaacaacgtatcggtaagtttgaactggccaatggcggcactttgtttttagatgagatt
ggcgacatgagcctgtctgcgcaggctaaagtacttcgagccttacaggaacataaaatt
acacgtgtaggtggagaaaaagaactggaagtcaatgtccgagtactggcggcgacaaat
aaagacttgctcaaagaaattgaagccggaaatttcagaatggacttataccaccgttta
aatgtgatcaatattcatgttccacatttaactgagcgtacagaggacatccccgaaatt
gccttaaactttcttgaagaaatttgcagggactacggtatgccggttaaaaaaatcagt
gatggggctatgacagccttacaggctttgccatggacagggaatgtccgtgaattgcac
aatatgattgagcggctgattattttaagtgataaggttattactgaaaatgatgtaatt
gcttttgcgaatcctggcggcgggaccaatattggggctgtaaatacggcgaatggccag
tcaggactggcgcatgggccgacagttgattatgataaatttaataatttccaggattat
aaagatcatgcagaaagggaatttattaaattcaagctggaaaaaaacaactggaatgta
tctaaaacagctgatgatattgaaatccagcgtagtcacctatacagtaagattgaaaaa
ttcggtttgaaaagggtagcagaataa
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