Pedobacter heparinus: Phep_2526
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Entry
Phep_2526 CDS
T00978
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2526
Transporters [BR:
phe02000
]
Other transporters
Pores ion channels [TC:
1
]
Phep_2526
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ACU04730
UniProt:
C6XZN4
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All DBs
Position
complement(2929814..2931676)
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AA seq
620 aa
AA seq
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MFYSFSMVFPARAQQGRVKLNKDTVNKLNEVVVKENRLQLPFSKQNRNIWIMDREKVLGL
PARSVAELLSYISGVDVRQRGPGGVQADISIDGGTFDQSLVLINGFKVSDPQTGHNMMNL
PISINDIDHIEVLRGSASRVYGINALTGAINIVTRNAQQTGLSANVFAGSSFKDNISGDT
YYNYGLQATGNLVSKTAQHLFSASQEAGNGYRYNTAFNNQKVYYQGKFAAGKTDVIDVLA
GYTHNNFGANAFYSAPGDKEAEETVKTALASVSYTAKLGQNWIMVPRISFRNNTDDYLYI
KQTPDKFHNHHQTNVFDAELNNNIQTDIGVFGLGLEARSERINSTNLGKRNRNNAGLFAE
YKFEPLIHLQINLGAYINYNSDYGWQSFPGLDLGYNFYGNWRVFANVGTGQRLPTYTDLY
YKGPTNIGNDQLKPEKSRYAEAGVKFNNENFTMNASYFVRRIDNFIDWVKNIQTDPWQPQ
NFSRVNTNGLTFSTDYTRKLEGQVLNHIRIGIAYTNLDPSFKKTSATANFSRYALESLRN
QLSSTISGEFYQLFSLTLTSRYNERINYKDYMTMDARIAFKQKHYSLYAEGANLFNIQYI
EAGAVPMPGSWFTTGLKTSF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgttttcgatggtttttcctgcccgtgcacagcaaggccgggttaaatta
aataaggataccgttaataaactgaatgaagttgtagtaaaagaaaacaggcttcagctt
cctttttccaagcaaaacagaaacatctggatcatggacagggagaaggtcctgggtttg
ccggcaaggtcagttgccgaattgctcagctatatttcaggtgtagatgtccgtcagcgt
ggtcccggtggtgtgcaggccgatatcagtatagatggggggacatttgaccagtcgctt
gttctgatcaatggcttcaaagtttctgatccgcagacaggccacaacatgatgaaccta
cccataagcataaacgatattgaccatatcgaagtcttgcgtggatcggcgtcccgggtt
tatggtattaacgctttaaccggtgccattaatattgtaacccgcaatgcgcaacaaaca
ggcctttctgcaaatgtatttgccgggagtagttttaaagacaatatttcgggtgataca
tattacaattatggtcttcaggccacagggaacctggtgtcaaaaacggctcagcacttg
ttttcggccagccaggaggcaggtaatggctatcgttacaatactgcttttaacaatcag
aaagtatattaccagggaaaatttgctgcgggtaaaacggatgtaattgatgtgcttgcc
ggttatacccataataattttggtgcaaatgctttttattcggcaccaggcgataaagaa
gcagaagaaaccgtaaaaacagccctggcctcagtttcttataccgctaagctgggccaa
aactggataatggtgcccagaatcagcttcaggaacaacacagatgattatctttacatc
aaacaaacgccggataaatttcataaccatcaccagactaatgtttttgatgcagaactg
aacaataatatacaaaccgatataggggtttttgggctcggactggaagcaaggtcagag
cgcattaacagtacaaacctgggtaaaaggaaccgtaacaatgcagggctttttgctgaa
tataaatttgaaccgctcatacatttacagatcaaccttggggcttatataaattacaat
tcggattatggatggcaaagcttcccgggactggaccttggatataatttttatggtaac
tggcgtgtattcgccaatgtcggaaccggacaacgcctgcctacgtatacagatctctac
tataaaggacctaccaatatcgggaatgatcagctaaaaccggaaaaatccagatatgcc
gaagccggagttaaatttaacaacgagaactttaccatgaatgccagttatttcgttcgc
cgcatagataacttcattgattgggttaaaaatatacagaccgatccatggcaaccacaa
aactttagccgcgtaaatacaaatggtcttaccttcagtacagattatacccggaaactg
gaaggacaggttttgaaccacatcaggattggtatagcttataccaatttggatcccagc
tttaaaaaaacatcggctacagcaaatttttcgcgttatgcactggaaagtctgaggaac
caactgagcagtaccatcagcggagagttttatcagctgttctcgcttacgttaaccagc
cgctacaatgagcgcatcaattacaaggattacatgaccatggatgcgagaatagccttt
aagcaaaaacactatagcctatatgctgagggggcaaacctgtttaacattcagtacatt
gaagctggagcagtgcccatgcctggcagctggtttacaacagggttaaaaacgagtttt
taa
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