Pedobacter heparinus: Phep_2529
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Entry
Phep_2529 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2529
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_2529
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Glu_cys_ligase
Motif
Other DBs
NCBI-ProteinID:
ACU04733
UniProt:
C6XZN7
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All DBs
Position
complement(2934579..2936318)
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AA seq
579 aa
AA seq
DB search
MNNENTSYKNRRSFLREATFYGLSSFIAMPALASLLSGCSKDFLDRQPLDAITDVSFWET
EEQLKLAVNGCYAYLKGKSETLQDSYVDLERCGDNIIYPPLSDYLSISTGVFDYNLPSIN
NEWVKQYAAIRRCNHFLQNYEKAKGVKPDLLSRYAAEVRFLRAHYYSFLIMLFGDVPLIT
KTLNIGDPEIMATQTPKAEVLNFVLQELEAAAPSLPPTYTAVDSGRITRGAALGWKAKVA
LFFQKWDVAEAAAKAVMNLGIYSLYSNGNTSTSYKELFTYKGKITNAANKETILARPYLA
NVSEHNLSRESWVPDQVSRFSITKSLVDAYLCSDGKPIDKSALYSESTYAAIFQNRDPRM
IQTVLSPGTAWEGKDDGDQDSNPNAIFNLPKWDADKKGTVTGTGYYNLKYVEPTAVGVYN
KDANDIHLLRYAEVLLTYAEARMEQGTLTQTDLDDTINKLRTRVGMVQMKITELNAWGMD
LRTEIRRERRIELALEGHRYFDILRWKQGSLLAEDVKGIKKSLVPAYNQVYIATIPTDAQ
GYLIINSGRKFVEPKNYLWPVPLPQKDLNPNLIQPDGWK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgaaaatacatcatataaaaaccgcaggtcatttttacgtgaagccacattc
tatggcctgtcctccttcatcgccatgcctgccctggcttccctgttaagcggatgctcc
aaggattttttagatcgtcagccgctggatgccattaccgatgttagtttctgggaaact
gaagaacaacttaagctggccgtaaatggctgctatgcttatctgaaaggaaaaagtgaa
accttgcaggatagctatgttgatctggaacgctgtggcgataacatcatctatccgcca
ctttccgactacctgtctatctctaccggtgtttttgattataaccttccctcgatcaat
aatgagtgggtaaaacaatatgctgcgatccgcaggtgcaaccattttctccagaattat
gaaaaagcaaagggtgtaaagccagatctgctcagcaggtatgccgcagaagtaaggttt
ttacgcgcccattattatagctttctgatcatgttgttcggcgatgtgcctctgatcacc
aaaaccttaaatataggtgatccggagataatggccactcagacgccaaaggctgaagta
ctgaactttgttttgcaggaactggaagctgcagcgccttcgcttcctccaacttataca
gccgttgattcgggtaggattaccaggggcgcagccctgggatggaaagcaaaagttgcc
ttgttctttcagaaatgggatgtggctgaagcagccgctaaagccgttatgaatttaggg
atatacagcttgtactcaaatggaaataccagcacaagctacaaggaactgtttacttac
aaaggtaaaataaccaatgctgccaataaagaaactatcctggccaggccatatcttgcc
aatgtatcggagcataacctcagcagagaaagctgggtgcccgatcaggtttcgcgtttt
agcattaccaaatcccttgtagatgcttatttatgcagcgatggaaaaccgattgacaaa
tctgccttatatagcgaaagcacttatgctgctattttccagaacagggatccccggatg
atacaaactgtgctaagtccaggtacggcttgggaaggtaaagatgacggtgatcaggat
tcaaacccaaatgccattttcaatttgccaaaatgggatgccgataaaaaaggaacggta
accggtacaggttattacaaccttaaatatgtagagccaactgcagtgggtgtttataat
aaagatgccaacgacatccatttgctgaggtatgcggaggtcttgctgacctacgcagaa
gccaggatggagcagggtactttaacccagaccgatctggacgataccattaataaatta
agaaccagggttggtatggtccagatgaagatcactgagctgaatgcctggggtatggac
cttcgtaccgagatcagaagggaacgcaggattgagctggcactggaaggacaccgttat
tttgatatcctgcgctggaagcaaggcagcttactggcagaagatgtgaaagggataaag
aaaagtcttgtgccggcttacaatcaggtctacattgctactatccccacagatgcacag
ggttaccttattatcaattcaggacggaaattcgtagaacctaaaaactacctgtggccg
gtaccattgccacaaaaggatctgaaccctaatctcattcagccagatggctggaaataa
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