Pedobacter heparinus: Phep_2640
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Entry
Phep_2640 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2640
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_2640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACU04841
UniProt:
C6Y0C9
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All DBs
Position
complement(3075561..3077315)
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AA seq
584 aa
AA seq
DB search
MKNIYTLLLIVLVSTALLSCTKDFLDKTPDEDLTVAQVFADKNYAERWLYSCYVSLPLEI
NPIEGALGFNPFTGSSDDMEITSPAAASQILNNNSYSPANFLADYQYHYQVLRKINLFLE
NIGQTPVDQVEKNKMIGEALFLRAFFHFMSFRMYGPTIIADKAYKTDDDFVSLDRSPVAD
VVGFMTADLDQAASLLDQALIPSKFGLANGAAALALKSRILLYAASPLYNGNPKYASFKN
RYGQHLFLTNFEKDRWAVAAKAAKECIEKAEAAGYILYTDPSNDPVLNYSGAFNKNWNSE
IFFAKNLGNYQQQEKWAYPYGFGGQSQLCPTQEIVNDYEMSNGLAITENGSGYIELGYAA
ANDPKGRWLAGTRNMYVNREPRFYASIIYNGSYFKTRQVQFWNSGLDGKSKSPAAYAKTG
YLMKKFIDMSVDIPKGVWAQKTWVYLRLNEVYLNYAEALNESEGPVSDVYKYINLIRNRS
GLPNLPANLTQDQMRERIRHERRIELAFDTHRYFDINRWLLAETLNSQSVTGMNTAAGTS
LSDNSFYIRTEVEKRSFTSPRNYFFPYPQAVLTMNRDITQTPYW
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatatataccctattgcttattgtgctggttagcactgcgctgctttcgtgt
actaaggattttcttgataaaacgccagatgaagaccttactgtagcccaggttttcgcc
gataaaaattatgctgaaagatggctgtattcctgttatgtttcattgccactggagatt
aacccgatagaaggggcgcttggttttaatccctttacgggctcgtccgatgatatggaa
atcacgagtccggccgccgcatcccagatcctcaacaacaactcttactcgccggccaat
tttttagctgattaccaatatcactatcaggtgctcagaaaaattaacctttttctggaa
aacatagggcaaacgcctgtggaccaggtggagaaaaataaaatgatcggtgaagcctta
tttttaagggccttctttcattttatgtcgttcaggatgtacggaccaacaattatagca
gacaaagcatataaaacagatgatgattttgtttcactggaccgtagcccggttgctgat
gttgtcggttttatgactgctgatcttgatcaggcggcctcacttttagaccaggccctg
atcccaagtaaatttggcctggcgaacggtgcagcagcacttgctttaaaatcaaggata
ttattgtacgcagccagcccgttatacaatggaaacccgaagtatgcaagctttaaaaac
aggtatggacaacatttatttctgacaaatttcgaaaaggatagatgggccgtggcggca
aaagcggcaaaggaatgtatagagaaggctgaagctgccgggtatattttatataccgat
ccttcaaatgatcctgttttaaattattcaggggcttttaacaagaactggaactccgag
atattttttgcaaagaacctgggaaattatcagcaacaggaaaaatgggcatatccatac
ggatttggcggacagtcgcagttgtgcccgacacaggaaattgttaacgattacgaaatg
agcaatggcctggctataaccgaaaacggctctggctatatagaattaggttatgcagct
gccaatgaccctaagggcagatggctggccgggacccggaatatgtatgtaaacagagaa
cccaggttttatgcaagtatcatttacaacggttcctatttcaaaacgcggcaggtacaa
ttttggaattctggccttgacgggaaatcaaaaagccctgccgcctatgcgaagaccggc
tatctgatgaaaaaatttattgacatgtctgttgatatccctaaaggtgtctgggcacag
aagacatgggtttatcttaggctgaacgaagtgtatctaaattatgcagaggcactgaac
gaatcagaaggccccgtatctgatgtttacaaatatataaaccttatccgcaaccgttcg
ggccttcctaatctgcctgcaaaccttacccaggaccagatgagggaaaggatcagacat
gaaagacggatagaactggcatttgatacccacaggtattttgatatcaacaggtggttg
ctggcagaaacgttaaatagccagtctgtaacaggaatgaacactgctgccgggaccagc
ctttcagataacagtttttatatcaggaccgaggttgaaaagcgaagttttaccagtcct
agaaactattttttcccttatccgcaggcggtacttaccatgaacagggacattacacaa
accccatactggtaa
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