Pedobacter heparinus: Phep_2721
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Entry
Phep_2721 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2721
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_2721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACU04922
UniProt:
C6Y0Z5
LinkDB
All DBs
Position
complement(3207159..3208811)
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AA seq
550 aa
AA seq
DB search
MKSLHKNILSCFLALAGIFSLASCEKELDKTPESQLSDADFWNNTEDLKLAANYFYSYLP
VIQDNINANWSDDGFANGGANAISDGSRTVPATSTDWSDNYKLIYNCNNLLEKSVRVKGD
QKLIDRYRAEASFFRAFAYANLVKRFGDVPLILRTFDVSDTLNQAHRTPRQAVVDVIYTD
LDFAAANLPASSALPAAEYGRITSGAALSLKARVALHEGTLKKFHGKGDPAKDLGIAVTA
SETVMKSGLYSIFRYAAKPDSSFYYLFQPANEAPVNKEAILVRLYGENLANPIAFHNFPA
ELGAGSNTTPTKALMDAYLYTDGLPQGKSPLQKTETTTLTQFENRDPRMGMTVFNKTHYY
VTSFYLPTLTFAPTGYKVRKYFNTVDFIAKRSFVDNMTIRYAEILLIYAEAKFELNGSIS
DDDLNKSINLIRSRAKMPALTNAFVTANGLDMRNEIRRERRIELAVEGQHRYWDLIRWKT
AEIELPKLILGARFFANEFEKATPKLDAQGYIIVQEAAKRKFNPERDYLWPLPTRDLGLN
LSLTQNPRWQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattacataagaatatactttcctgctttctggctttggcaggaatatttagc
ctggcctcctgcgaaaaggaactggataaaacgccggaatcccagttgtcggatgccgat
ttctggaacaataccgaagaccttaagctggctgcaaattatttttattcctatcttccg
gtcattcaggataacatcaacgccaactggtctgacgacggctttgccaatggcggagcg
aatgccataagtgatgggtcgcgtacagtacctgctacttcgaccgactggtcggataat
tataagctgatctataactgcaataacctgctggaaaaatctgtgcgggtaaagggcgac
cagaaacttatagaccgttaccgggcagaggcaagttttttcagggcttttgcttatgct
aacctggttaagcgctttggggatgtaccgctcattcttcgtacctttgatgtatccgac
acgctgaaccaggcacatcggaccccacgtcaggctgtggtagatgttatttatactgat
ctggactttgccgcggctaatctgcctgcttcttctgctttgcctgctgccgaatacggt
cgcatcacctcgggggctgctctgtcgcttaaagcccgggttgccttgcatgagggtacg
ttaaaaaagtttcatggaaaaggtgatccggcaaaggatcttgggatcgcagttactgct
tctgaaactgtaatgaagtctggtctgtacagcatctttcgctatgcagccaagcccgac
agtagtttttattacctgttccagcccgcaaacgaggccccggtaaacaaagaagccata
ctggtgcgcctgtacggagaaaatcttgccaatcccattgcttttcacaattttccggcc
gaattgggcgcaggcagtaacactacgcctaccaaagcccttatggatgcttatctatat
acagacgggttaccacaaggtaaatcgcccctgcagaaaaccgagaccactacacttacc
cagttcgagaaccgcgatccgcgcatgggcatgacggtattcaataaaacacattattat
gtgaccagcttttaccttcctacgcttacttttgcacctaccggctataaggtccgtaaa
tatttcaacactgtcgattttattgccaaacggtcattcgtagacaatatgaccatccgc
tacgcagaaatattgctgatctatgcagaagctaagtttgaattgaacggaagtatttca
gacgatgatctgaacaagagtatcaacctgatccgcagccgtgcaaaaatgcctgcactc
accaatgcctttgtaactgctaatggcctcgacatgcggaacgagatccggcgcgaacgg
agaattgagcttgcagtggaaggccagcaccggtattgggacctgatccgttggaaaacc
gcagagatcgaacttcctaaattgatcctcggcgcccgtttttttgcaaacgagtttgag
aaggcaacacccaagctggatgcccagggatacattattgtacaggaagcagccaaacgt
aaatttaatccggagcgggattatctatggcccctgccaacgcgcgaccttggtttgaac
ctgagccttactcagaatccacgctggcagtaa
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integrated database retrieval system
