Pedobacter heparinus: Phep_3018
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Entry
Phep_3018 CDS
T00978
Name
(GenBank) succinyl-CoA synthetase, beta subunit
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
phe
Pedobacter heparinus
Pathway
phe00020
Citrate cycle (TCA cycle)
phe00640
Propanoate metabolism
phe00660
C5-Branched dibasic acid metabolism
phe00720
Other carbon fixation pathways
phe01100
Metabolic pathways
phe01110
Biosynthesis of secondary metabolites
phe01120
Microbial metabolism in diverse environments
phe01200
Carbon metabolism
Module
phe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Phep_3018
00640 Propanoate metabolism
Phep_3018
00660 C5-Branched dibasic acid metabolism
Phep_3018
09102 Energy metabolism
00720 Other carbon fixation pathways
Phep_3018
Enzymes [BR:
phe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Phep_3018
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ACU05216
UniProt:
C6Y2K6
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All DBs
Position
3608571..3609761
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AA seq
396 aa
AA seq
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MNIHEYQGKEILKSFGVAVQEGIVADTVEQAVEAAKKMKTDYNSDWVVIKAQIHAGGRGK
GGGVKLAKNLDEVKERATAILGMQLVTPQTGPEGKKVNKILVAQDVYYPGASETKEFYIS
VLLNRGNGRNIIMYSTEGGMDIEEVAEHTPHLIFKEEIDPKVGLQAFQARKIAFNLGLSG
AAFKEMVKFVTALYKAYDSTDSAMFEINPVLKTSDDKIIAVDAKVDLDENALFRHPDYAA
MRDKLEEDPTDVEASESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGGEPANFLDVGG
TANAQTVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYNEIGNVPVPIICRLQ
GTNAEEAKKLIDESGLKVYSAIALKEASDLVTKVLA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccacgaatatcaaggtaaagaaatacttaaaagttttggtgtagccgtacaa
gaaggtatagttgccgacacggtagagcaggctgtagaagctgctaaaaaaatgaaaact
gactacaattctgactgggttgtaattaaagctcagatccacgcaggtggacggggtaaa
ggcggtggtgtaaaactagccaagaaccttgatgaggttaaggaaagagcaactgcaatt
ttaggaatgcagcttgtaactccgcaaactggtcctgaaggaaaaaaagttaacaagatt
ttagttgcccaggatgtatattatccgggagcttctgaaaccaaagagttctatataagc
gttttattgaaccgtggaaatggaagaaacatcatcatgtattcgactgaaggtggtatg
gacattgaagaagttgcggagcatacccctcatctgatctttaaagaagaaattgaccct
aaagttggcttacaagcatttcaggcacgcaaaattgcttttaatttaggtttaagcggt
gcggcttttaaagaaatggtaaaatttgtaactgcactttacaaagcttatgacagcacg
gattctgcgatgttcgaaatcaatccagtgttaaaaacttctgatgacaagatcatcgct
gttgatgctaaagttgatctggatgagaatgcattgttccgtcatcctgattatgcagca
atgcgcgataaactggaagaagatcctacagatgtggaagcaagtgaatctaaccttaat
tatgtaaagcttgacgggaacgtgggttgtatggttaatggtgccggtttagctatggct
actatggacatcattaagattgccggtggcgaacctgctaacttccttgatgttggtggt
actgcaaatgcacaaactgtaaaggctggttttaacattatacttaaagaccccaacgta
aaagcaatcctgatcaatatatttggtggtattgtacgttgtgaccgggttgcacaagga
gtaatagatgcatataatgaaattggtaatgttccggttcctatcatttgccgtttacaa
ggtaccaatgctgaagaggcgaaaaaactgatagatgaatcaggattgaaagtttattca
gctattgctttaaaagaagcatctgacctggtaactaaagttttagcttag
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