Pedobacter heparinus: Phep_3042
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Entry
Phep_3042 CDS
T00978
Name
(GenBank) Asp/Glu/hydantoin racemase
KO
K01776
glutamate racemase [EC:
5.1.1.3
]
Organism
phe
Pedobacter heparinus
Pathway
phe00470
D-Amino acid metabolism
phe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Phep_3042
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phe01011
]
Phep_3042
Enzymes [BR:
phe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.3 glutamate racemase
Phep_3042
Peptidoglycan biosynthesis and degradation proteins [BR:
phe01011
]
Precursor biosynthesis
Racemase
Phep_3042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
ACU05240
UniProt:
C6Y2N0
LinkDB
All DBs
Position
3635802..3637328
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AA seq
508 aa
AA seq
DB search
MKFNRNFLCCISAVLVFSTTESRAQNTKPEAIENAILKDKKNFYYIDFKKYNAADPSLPI
GVFDSGTGGLTILNTLVQFDQHNNATKFAGKDNIPDFAKEKFIYLADQANMPYGNYYSEK
KNDLLVEHIIKDAQFLLSDKYYLNNTTKNYSSDKQKVKAIVIACNTATAYGKEYIEDFIK
TTGINLKVIGVIDAGAQGTLDVFKKDENGSIGVFATVGTIASKGYENTILALKDKLGYKG
NLQVYNQGGYGLAEAVDEEPDFINRKAIAPTANYRGPKLDSGAYKIERTLLDVYNFDFSN
HKMLCDSKSDECGNMQLNAADNYARYHLVSLMEKIRNTKGAQPLKALVLGCTHYPFLISD
IRKILSDLYNFQKNGNFIYRTFMNKDIQIIDPAINVATELYTYLNKQHLFNPAGNMNASE
FFISIPNADNKTVITDKEGRFTYNYKYGRNAGEIQEYVKVVPFSRNNIPAETLDRIKTVI
PSTYELIKKFHTDNSKLLTLPEAEKIKP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaacagaaattttctatgctgtatatccgcagtacttgtgttcagtacaacc
gaatcgcgtgctcaaaatacaaaacctgaagccattgaaaatgcgatattaaaagacaaa
aagaatttctattatattgattttaaaaaatataatgcggcagacccaagccttcctatc
ggagtttttgattctggcacaggtggtttaactatattaaacacattggttcagtttgac
caacacaacaacgcaacaaaatttgcggggaaggacaatatccccgattttgcaaaagaa
aagtttatttatcttgctgaccaggccaatatgccttatggcaattactatagtgaaaag
aaaaatgatcttttagttgaacatatcatcaaagatgcacagtttcttttatctgataaa
tactatttaaataacactactaaaaactacagttcagacaaacaaaaagtaaaagccatc
gttattgcctgtaacactgctactgcttatggaaaggaatatattgaagatttcataaaa
actactggcattaatttaaaggtgatcggtgtaattgatgccggtgcacaaggaacgctt
gatgttttcaaaaaggatgaaaacggttcaattggtgtttttgctacagttggcaccatt
gcctcaaaaggttacgaaaatacaattcttgccctcaaagataaacttgggtataaagga
aatctacaggtatacaatcagggtggttacggtcttgcagaggctgtagatgaggaacct
gactttattaaccgcaaggccatcgcgccaaccgcaaattaccgcggcccaaaacttgat
agtggagcttataaaatagaaagaaccttactcgatgtttacaattttgattttagtaac
cataaaatgttatgcgatagcaaaagtgatgaatgcggaaacatgcagttaaatgctgcc
gacaattatgcccggtaccacctggtttctctgatggagaaaataaggaacactaaaggt
gcacaaccacttaaagcccttgtacttggctgtacccattatccttttttaatcagcgac
atccgaaaaatcctttctgatctttacaacttccagaagaatggtaattttatctatcgc
acgttcatgaataaggacatacagatcattgatccagcgataaatgtagccacggaactt
tatacttacttaaacaaacagcatctttttaatcctgcaggaaatatgaatgccagtgag
ttctttatcagtatacccaatgctgacaataaaaccgtaattacagacaaagagggcaga
tttacgtataactacaaatatggaagaaatgcaggtgaaatacaggaatatgtaaaagta
gtgcccttcagcagaaataatattcctgccgaaacactcgaccgcatcaaaacggtgatc
ccttcaacttatgagttgataaaaaagtttcatactgataattcgaaactgcttacttta
cctgaagcagaaaaaataaaaccgtaa
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