Pedobacter heparinus: Phep_3372
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Entry
Phep_3372 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_3372
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_3372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_7
TPR_19
TPR_2
Transposase_1
Motif
Other DBs
NCBI-ProteinID:
ACU05566
UniProt:
C6XSK3
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All DBs
Position
4009815..4011464
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AA seq
549 aa
AA seq
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MKNLNYNIKHSFTLLVAILLLAQGCKKALEKSPLDKFDSANFWTSESNTQLALTGVYRGN
IKINGTEVLASDWWSYAGLLFTEFSTDNAYDRRGDNSSYNKLSNGTLTANLDVFKSYWSS
SYAKVARANYFLENVDKAPIDPTRKKRYIAEVRFIRACQYFYTAQYWGAAPLVTKTLTAQ
EANTVTKASKAEIVKFVIDELKAAIADLPRHKDIPKAELGRASRQAALAFLGRLYLAEQK
YSDAAAAYKEIIDYGDNIIDPDYAGLFQTSNENSNEIIFSTQFIENLSANAMNQHFFPAV
AAGWHIFCPLGSIVETYEFKDGTPFSYTDPRYNAADIGKDRDPRLKYSVLYNLNTFKNLK
YVTHPDSATSPDQLGAGKQTTQTGYGLKKFCDESFSGSLTNYGGNLPIIRYAEVLLSYLE
AKLEAGDPIDQILLDATINKVRSRATVNLPPVTVTNTTDLRTKLRRERRVELAFEGIRYW
DLIRWKIGNTVLNGDFYGAPFPGAVKTRKKGNITDPYSRWYVTSKAFRVTDHVWPIPQSE
VNINPGLAN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctcaattacaatatcaaacacagttttacattgctcgttgcaatactttta
cttgcacaaggatgcaagaaagccctggaaaaatctccgctggataaatttgacagtgcc
aacttctggacaagtgaatccaatacccagctggccttaacaggtgtttaccgtggaaac
attaaaatcaatggcactgaagtgctggccagcgactggtggtcttatgcagggctatta
tttaccgaattttctacagacaatgcctacgacagaaggggcgataattcctcctataat
aaattgtcaaatggtacactaactgcaaatctggatgtctttaaaagttattggtccagt
agttacgccaaagtggccagagccaactattttctggaaaacgtagataaagcaccgata
gatccaacccgaaaaaaacgctacattgccgaagtccggtttatcagggcctgtcagtat
ttttacacagctcagtactggggtgcagcaccacttgttaccaaaactttgacggcacaa
gaggccaataccgttacaaaggccagcaaagcagaaattgttaaattcgttattgatgag
ctaaaagctgctatagctgacctgccacggcataaggatatccccaaggctgaacttgga
agggcgagcagacaggctgcgctggcatttttaggccgtttataccttgctgaacaaaaa
tacagcgatgcagctgctgcatataaagaaatcatagattatggggataacattatcgac
cctgattatgcagggctattccaaacctccaacgaaaatagtaatgagatcattttcagt
acccaattcatagaaaatcttagcgctaatgcgatgaaccagcatttctttccagcagtt
gccgcaggctggcacatcttctgccctttggggagcattgttgaaacctatgaatttaag
gatggtacgcccttttcttatacagatccgagatataatgccgccgatattggaaaagac
agggatccgcgtttaaaatatagtgtattgtataacctcaatacctttaaaaatctgaaa
tatgttacccatcccgattctgccacttctccagaccagttaggtgcaggtaaacaaacc
acgcaaaccggttatggcctcaaaaagttctgcgatgaaagtttctctggaagcctgacc
aattatggcggtaatttgcccataatccgctatgcagaagtattgttaagttacctggaa
gcaaagcttgaagccggagaccctattgaccaaatcctgcttgatgccaccattaataaa
gtaaggtcaagagccactgtaaacctgcccccggttacagttacaaatactaccgatctg
cgtacaaaattacgtagagaacgtcgtgtagagctggcatttgagggcatcaggtattgg
gacctgatcaggtggaagatcggaaacactgttttaaacggcgacttttatggagcgcca
tttccgggagcagttaagacgagaaaaaaaggaaatattacagatccatacagcaggtgg
tatgtcacttcaaaagcattcagggtaaccgaccacgtttggcctataccgcaaagcgaa
gtaaatataaatcccggactggccaattaa
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