KEGG   Pedobacter heparinus: Phep_3470
Entry
Phep_3470         CDS       T00978                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
phe  Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:phe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phe03032]
    Phep_3470
   03036 Chromosome and associated proteins [BR:phe03036]
    Phep_3470
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:phe02048]
    Phep_3470
Enzymes [BR:phe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Phep_3470
DNA replication proteins [BR:phe03032]
 Prokaryotic type
  DNA Topoisomerases
   Phep_3470
Chromosome and associated proteins [BR:phe03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Phep_3470
Prokaryotic defense system [BR:phe02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Phep_3470
SSDB
Motif
Pfam: DNA_topoisoIV MurD_N
Other DBs
NCBI-ProteinID: ACU05663
UniProt: C6XSV0
LinkDB
Position
complement(4122690..4125623)
AA seq 977 aa
MSEEIENNINEENKHTVIPINGLYENWFLDYASYVILDRAVPHINDGLKPVQRRIMHSLK
EMDDGRFNKAANVIGNTMKYHPHGDASIGDAMVQIGQKDLLIDCQGNWGDPITGDNAAAP
RYIEARLSKFANEVVFNGDTTIWQLSYDGRNNEPVTLPVKFPLLLAQGAEGIAVGLATKV
MPHNFIELLDASIEALQGHRPNILPDFFTGGMADFSAYNEGMRGGRIRVRAKITEKDKKT
LVITEIPYSTTTGSVIDSILSANDKGKIKIKKIEDNTAAHVEIVIQLAPGISPDVTIDAL
YAFTSCEVSISPNTCIIKDEKPQFLSVNDILIENSMHTKALLKKELEIKLHELQEKIFFS
SLLKIFIQEGMYKNAEYENSVNFEMVVEVLNRLFEPFKPGLYREILPEDFKKLIDKPMSS
ITRFDVKKADEQMKALSDEIKVVKNHLRHLTEYAIAWFQKLKDKYGKGRERKTEIRLFDR
VEASKVALANVKLYMNREDGFIGTGLRKDEFVADCSDIDELIVFREDGKCIITKVADKTF
VGKGILHAQVFKKGDERTIYNMIYKDGASGVSYIKRFAVVGVTRDKEYDLTKGSKGSKVL
YFTANPNGEAEIVTVQLKPHSKLKKLQFDLDFAEIAIKGRGSQGNIVSKYPVKKILLKSK
GVSTLSGLKIWYDDLLRRLNVDGRGKYLGEFDGEDKILQVHKDGWYELSTFELSNHFDAD
LILIQKFDPEKPFAVVQYEGKAKNYFIKRFLFEAIAVGKKVSLISEENGSKFLYLSSNPA
AVLTVDVLKGKTQVPETLEIVLAEFIDVKGIKANGNRLTAHEVKNITISNHTEIEPAEEV
KVVSVANEAEDEFQEDEAAATNIENGEELVDPALSKDADEEEAPLPEPEIPATEKPAAAE
KPKKQWDSGATKPAEAPKPKKETGPAKEKSADETKPKKEPIAKPEPEQEEKPAKKIDFEI
TNPDDIKIDDKGQLGFF
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgagcgaagaaatagaaaacaacataaacgaagaaaataaacataccgtaattccaatc
aacggactttatgaaaactggttcctcgactatgcttcttatgtaattcttgaccgcgct
gtgccacacatcaatgatggcttgaagccggtgcagcgacgtatcatgcattctttgaaa
gagatggatgatggacgcttcaataaggcagccaacgtgattggaaatacaatgaaatac
catccgcatggggatgcttccataggtgatgccatggtgcagattggacaaaaagacctg
ctgattgattgccagggtaactggggagacccgattaccggtgataatgctgctgcgccg
cgttatattgaggcccgtttatctaaatttgccaatgaagttgtgtttaatggtgataca
accatctggcagttgagttatgacgggcgtaacaacgaaccggttaccttgcctgttaaa
ttccccctgttgcttgcccagggagctgaaggtattgccgttggtttagcaaccaaagta
atgccacataactttatcgaattgctggatgcttctattgaagcattgcaagggcatcgg
cctaacattttgcccgatttttttacaggtggtatggccgatttttctgcttacaacgag
gggatgcgtggcggccgtatcagggtgagggccaaaatcaccgaaaaggataaaaaaaca
ctggttattaccgaaataccttacagcacgactaccggatcggtaattgacagtatctta
tcggccaacgacaagggcaagatcaagatcaaaaagattgaggacaataccgctgcccat
gtcgagatcgtgatccagctggcaccaggtatttctcctgatgtgaccattgatgcctta
tacgcctttacttcatgtgaggtttcaatatcaccaaatacctgcatcattaaggatgaa
aagcctcagtttttaagtgttaatgatatcctgatagagaattcgatgcacaccaaggcc
ctgttgaaaaaggaactggaaattaaactgcatgaattacaggaaaagatatttttcagc
tcattgctaaagatatttattcaggaagggatgtataaaaatgctgaatatgaaaattca
gtcaattttgaaatggtggtagaggttttgaacaggttgtttgagccttttaaaccaggt
ctttacagagaaatacttcctgaggattttaaaaagctgattgataaaccaatgagcagc
attacccgctttgatgttaaaaaagcggatgaacagatgaaagccctttctgacgagatc
aaagtggttaaaaaccatttacggcatttaacggaatatgccattgcctggtttcagaaa
ttaaaggacaagtatggtaagggcagggagcgtaaaactgagatccgtttgtttgatcgg
gttgaggcatctaaagtagccttggccaatgttaaactttacatgaaccgtgaagatggt
tttatagggaccggattgcggaaggatgaatttgttgccgattgttcagatattgatgag
ctcattgtttttagagaagacggtaaatgcatcattacgaaagttgccgataaaactttt
gtaggtaagggtatcctgcatgcccaggtatttaaaaagggggatgaacggaccatttac
aacatgatctataaagatggggcgagcggggtttcttatattaagcgttttgcagttgta
ggggttacccgtgataaggaatacgatctgacaaaagggagtaagggctcaaaagtgctg
tattttacagctaatcctaatggagaagccgaaattgtgactgtacagcttaaaccacat
agcaagttaaaaaagctgcagttcgatctcgattttgctgaaattgcgataaaaggacgc
ggttcacagggaaatattgtttctaaatatccggttaaaaaaatactgctgaaaagcaaa
ggcgtatctacactttcgggactaaaaatctggtatgatgatttgctaagaaggttaaat
gtggacggaaggggcaaatatcttggtgaatttgatggcgaggataaaatattgcaggta
cataaagacggctggtatgaactgagtacttttgagctgagcaaccactttgatgccgat
ctgatcttaattcagaagtttgaccctgaaaaaccttttgcagttgtgcaatatgagggt
aaagccaaaaactattttatcaaaaggttcctttttgaggcgattgctgtaggcaaaaaa
gtaagtctgattagtgaggagaacggatcgaagttcctttacctcagcagcaatccggca
gcggttttaacagttgatgtattgaaaggaaaaacccaggttccggaaacacttgaaatt
gttcttgccgaatttattgatgtaaaaggaattaaagccaatggaaacaggcttactgcc
catgaagttaaaaatataaccatttcaaatcacacggaaattgaacctgctgaagaagtt
aaagttgtttctgtggcaaatgaggctgaggatgagtttcaagaggatgaagccgctgca
acgaatatagaaaatggggaagaactggttgatcctgcattgagtaaagatgcagatgag
gaggaagctccgttacctgaacctgaaattcccgctactgaaaagcctgctgcggccgaa
aaacctaaaaaacaatgggacagcggggccaccaaacctgccgaagcacctaagccaaaa
aaagaaacgggtcctgccaaagaaaagtctgctgatgaaacaaaaccgaaaaaagagccc
atagccaaacctgagccggaacaggaagagaaacccgcaaaaaaaatagattttgagatc
accaatccggatgatatcaaaattgatgataaaggacagctagggttcttttag

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