KEGG   Pedobacter heparinus: Phep_3475
Entry
Phep_3475         CDS       T00978                                 
Name
(GenBank) DNA topoisomerase type IIA subunit B region 2 domain protein
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
phe  Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:phe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phe03032]
    Phep_3475
   03036 Chromosome and associated proteins [BR:phe03036]
    Phep_3475
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:phe02048]
    Phep_3475
Enzymes [BR:phe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Phep_3475
DNA replication proteins [BR:phe03032]
 Prokaryotic type
  DNA Topoisomerases
   Phep_3475
Chromosome and associated proteins [BR:phe03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Phep_3475
Prokaryotic defense system [BR:phe02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Phep_3475
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c HATPase_c_3 DNA_gyraseB_C
Other DBs
NCBI-ProteinID: ACU05668
UniProt: C6XSV5
LinkDB
Position
complement(4136552..4138453)
AA seq 633 aa
MAEPNYNEDSIRSLDWKEHIRLRPGMYIGKLGDGSAQDDGIYVLLKEIVDNSIDEFVMGS
GRTIEITVSDQKVNVRDYGRGIPLGKVIDCVSKINTGGKYDSKAFQKSVGLNGVGTKAVN
ALSTNFVVQSYRDNKTKKVEFSKGEIVLDNAIIDTTQRNGTAITFYPDETIFRNYHYIPD
FVESMIWNYVFLNAGLTINFNGQKYFSERGLYDLLHKHADVESVRYPIIHLVGSDIEIAM
THGQQYGEDYHSFVNGQHTTQGGTHQAAFREAVVKTIREFYKKEYDASDIRSSIIAAISV
RVQEPVFESQTKTKLGSQNMGPDGPSVRTFINDFVKKELDDYLHKHSDVADALLKRILQS
ERERKDIAGIKKLANDRAKKASLHNKKLRDCKIHFNSTHDKRYETTLFITEGDSASGSIT
KSRDVDCQAVFSLKGKPLNCYELTKKVVYENEEFNLLQHALNIEDGLDGLHYNNIVIATD
ADVDGMHIRLLMMTFFLQFFPDLVRAGHVYILQTPLFRVRNKKETIYCYSDDERKKAIEK
LGNKPEITRFKGLGEISPDEFGLFIGKDIRLDPVILKDQTIKNLLEYYMGKNTPDRQQHI
IRNLRIEKDEVSEDEIKAEPVVDDEAENNLDVA
NT seq 1902 nt   +upstreamnt  +downstreamnt
atggcagaaccgaattataatgaagatagtatacgctctcttgactggaaagaacacatc
aggttacgccccggtatgtatattggaaagctgggcgatggctcggcccaggatgatggg
atctatgtgttacttaaagagattgtagacaactctattgacgagtttgtgatgggctct
ggccgtaccattgagatcacggtttccgaccagaaagtaaatgtaagggattatggccgt
ggcattccattggggaaggtaattgattgcgtatctaaaattaataccggtggtaaatat
gacagcaaggctttccaaaaatctgtagggctgaatggggtgggtactaaagccgtaaat
gccttatctaccaattttgttgtacagtcttaccgcgacaataaaacaaagaaagttgag
ttctccaagggtgaaattgtactcgataatgccatcatagataccacccagcgtaatggc
accgctattactttttaccctgatgaaaccattttcagaaactaccattatatccctgat
tttgtagaaagcatgatctggaattatgtattcctgaatgcgggcctgaccatcaacttt
aacggacaaaaatatttttcagaaagaggactgtatgacctgctgcataaacatgcagat
gtagaaagtgtgcgttatccgatcattcacctggtagggagtgatattgagattgctatg
acacatggacagcaatatggtgaagactatcattcttttgtgaatggccagcataccacc
cagggtggtacacatcaggccgccttcagggaggctgtggtaaaaacgatccgggagttt
tataaaaaggaatatgatgcttccgatatcaggtcttctatcattgcagcgatatcagtg
cgtgtacaggaacccgtttttgaatctcagaccaaaacaaagctgggttctcaaaatatg
gggccagatgggccatctgtaaggacattcatcaatgattttgtgaaaaaggaattggat
gattatttacacaaacattccgatgttgcggatgccctgttaaaaaggattttgcaatcg
gaacgtgagcgtaaagatattgccggaattaagaaactagccaacgaccgggccaaaaaa
gcatcgttacataacaagaaactgagggattgtaaaattcattttaacagtacacatgat
aaaaggtacgagactactttatttattaccgagggtgactccgcatcgggatccattacc
aaatcgagggacgttgactgccaggccgttttcagtttaaaaggaaaacccctgaactgt
tatgaactgactaaaaaggtagtgtacgaaaatgaagagtttaaccttttgcaacatgct
ttaaatattgaagatggactggatggcctgcactacaataacattgtaattgcgactgat
gcggatgtggatggaatgcacatcaggttgttgatgatgacattcttcctgcagttcttc
cccgacctggtccgtgccgggcatgtatatattcttcaaacccccttattcagggtacgg
aataaaaaagaaacgatttattgctatagcgatgatgagcgtaaaaaggccattgaaaag
ttgggcaacaaacctgagatcacaaggtttaaaggtttgggagaaatttctcctgatgag
tttggattgtttatcggtaaggacatcaggcttgatccggtaattcttaaggatcagacc
attaaaaacctgttggaatattacatgggtaaaaacacacccgacagacagcagcatatc
atcagaaacctgcggatagaaaaagatgaagtgagcgaagatgagataaaagcagaacca
gtagttgatgatgaggcagaaaataacctggatgtggcttaa

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