Pedobacter heparinus: Phep_3547
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Entry
Phep_3547 CDS
T00978
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phe03016
]
Phep_3547
Enzymes [BR:
phe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Phep_3547
Transfer RNA biogenesis [BR:
phe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Phep_3547
Prokaryotic type
Phep_3547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACU05738
UniProt:
C6XTG0
LinkDB
All DBs
Position
4220932..4221618
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AA seq
228 aa
AA seq
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MREFNFVEGELLLINKPYKWTSFDVVGKIRNSLKPLKLKVGHAGTLDPLATGLLILCTGK
LTKQIDTFQAEEKEYTGTMVLGATTPSYDLETVVDQEFPLDGITEGAIYAATAPFIGDIQ
QYPPAHSAVKVNGERLYVKARRGEETELRLRNVTVSAFEITRIALPEIDFRIVCSKGTYI
RSLVADFGKQLNNGAYLSKLVRTRSGNFLLENALEVNDLVDYLRAKKA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagggaattcaattttgttgagggagagttactgctcatcaataagccctataaatgg
accagttttgatgtggtaggaaagatcaggaactcgctgaaaccattaaagctaaaggta
ggacatgccggaactttagatccgctggccaccggcctgctgatcttatgtaccggaaaa
ctgaccaaacagatcgatacttttcaggctgaagaaaaagaatataccggcacaatggtg
cttggggccactaccccatcttatgatctggaaacggtggttgaccaggaatttccattg
gatgggattactgagggtgccatttatgctgccacagcgccttttattggcgacatacag
caatacccgcctgcccattcggctgtaaaggtaaacggtgagcgcctttatgtaaaagcg
cgcaggggggaagaaacagaactgcgtttgcgtaacgttacagtatctgcttttgaaatt
acccggatagccctgccggaaatcgacttcagaatagtgtgcagtaagggcacctatatc
agatcgttggttgctgactttgggaaacagctaaacaatggcgcctacctgtctaaactg
gtacgcacgcgcagcggaaactttttattggaaaatgcgcttgaagtaaatgatcttgtt
gattaccttagagcgaaaaaagcatag
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