Pedobacter heparinus: Phep_3634
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Entry
Phep_3634 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_3634
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_3634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACU05825
UniProt:
C6XU32
LinkDB
All DBs
Position
4346071..4347597
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AA seq
508 aa
AA seq
DB search
MKTFNNKNFCLMLFSIAAITLLASCKKSFLDRDPQGTYTSDTYPYPKGSGPFDSEIFATY
DILRSYDASGSGFIAATGIRSDDADKGSTPTDGPTSLEMDNFNITTSNVLANDLWRGYFN
IVNKSNIVLDKVAKDLDPGTPAESKVFAEAEAKFLRGYAYFMLVRLFGRVPLIDKVFDDP
VAQSNVAQSEPAATYTLIESDLQFAGTNLPLSWDPSKFPGRATRGAANGLLAKVYLTRQN
WAAAQSAANLVITSQQYNLSTPYDDIFKETGENSKESVFEIQATANLTEKRSFGSQFASI
QGVRGTGIWNLGWGFNIPSPQLEGTYETGDPRKARTILYAGGTSVFGEVVPTGLPNTRYN
HKVHSNPATRNALLDNFSYWMNIRILRYADVLLMYAEAANEVGGTANTTAALDALNSVRK
RARGTTPGILPDITVTDQAQLREIIRHERRVELAMEHERFFDLVRWGIAGQVLQNAGKNF
VTGKHELLPIPFAQIEISKGVLKQNFGY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatttaacaataaaaatttctgtctgatgctttttagtatcgcagcaattacc
ttactggcgagttgtaaaaaaagcttcctggatcgcgatccacaaggaacatacacttcc
gacacctatccctatcctaaaggatcaggtccatttgattcggaaatatttgccacctat
gacatcctgcgctcatatgatgcctctggaagcggatttattgctgcaaccggtatcaga
agtgacgatgctgataaaggcagtacacctaccgatggccctacctcacttgaaatggac
aatttcaacattaccaccagtaatgtcctggcaaatgatctttggagaggctacttcaat
atcgtaaacaagagcaatattgtgctggataaggtagctaaagatcttgacccgggcaca
ccagcagaatcaaaagtatttgcagaagcagaagctaaatttttgcgtggctatgcctat
ttcatgctggtacgcttatttggcagggtgcccctgatagacaaagtatttgatgatccc
gttgcccaatctaacgttgcccaaagtgaaccggccgctacctataccttaattgaaagt
gacctgcagtttgccggaaccaacctgcccttaagctgggatccaagcaagtttcccgga
cgagcaaccagaggtgcggcgaacggcttactggccaaagtataccttacccgtcaaaac
tgggcagctgcccaaagtgccgctaacctggttattacctcacaacagtacaacctaagc
actccatatgatgatatttttaaagaaacaggtgaaaacagtaaagaatctgtattcgaa
attcaggcaacagctaacctgacggaaaaaagaagtttcggaagccagtttgcaagtatc
cagggtgtaaggggaacaggtatctggaaccttggctggggctttaatatcccaagtcca
caactcgaaggtacttatgaaaccggcgatccacgtaaagccagaaccattttatacgcc
ggaggcacctcagtttttggtgaagttgttcctaccggtttaccaaataccaggtacaac
cacaaagtacacagtaatcctgcaacgcgaaatgcactgcttgacaatttcagctattgg
atgaacatccggatcctgcgttatgcagatgtattactgatgtatgcagaagctgcaaat
gaagtaggtggcaccgcaaataccactgctgcgctagatgcattgaacagtgtaagaaaa
agagcaagaggaacaactccgggtattttaccagacatcacggtaactgatcaggcgcag
ctgcgcgagatcatccgccacgaaagaagggttgagctagccatggaacatgagcgtttc
tttgacctggtacgctggggcattgccggacaggtactgcaaaatgcagggaaaaatttc
gttaccggcaagcacgaactcttacctatcccttttgcacagatagagatcagcaagggt
gtattgaaacaaaattttggttattaa
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