Pedobacter heparinus: Phep_3724
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Entry
Phep_3724 CDS
T00978
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
phe
Pedobacter heparinus
Pathway
phe00071
Fatty acid degradation
phe00362
Benzoate degradation
phe00650
Butanoate metabolism
phe01100
Metabolic pathways
phe01120
Microbial metabolism in diverse environments
phe01200
Carbon metabolism
phe01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Phep_3724
09103 Lipid metabolism
00071 Fatty acid degradation
Phep_3724
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Phep_3724
Enzymes [BR:
phe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Phep_3724
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Pyr_redox_2
ApbA
NAD_binding_2
Pyr_redox
DAO
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
ACU05915
UniProt:
C6XUC2
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All DBs
Position
complement(4443242..4445605)
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AA seq
787 aa
AA seq
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MMNKKINRVAVLGSGIMGSRIACHFANIGVEVLLLDIAAKEGDKNSIVNTALQTAVKTNP
SPVYSKKVLTNIATGNFEDDMSKIAAYDWIIEVVVENLDIKKKVFEQVEQYRKPGTLVTS
NTSGIPIHLMAEGRTDDFKANFCGTHFFNPPRYLRLLEIIPTPHTRPELVDFLMHYGDKF
LGKTTVLCKDTPAFIANRVGVYSIMALLHLVEKMDLTVEEVDKFTGPALGRPKSATFRTT
DVVGLDTMIKVAKGLYDNCPDDKAHELFKLPGYVEKMEANKWLGDKTGQGFYKKTKSAEG
KTEILALDLKTMEYRPQEKVKSATLELTKPIEQVRDRMKVFAAGKDKAAELFRASFFGLF
EYVSDRIPEISDELYRIDDAMRAGFGWELGPFEVWDAVGVAEAIEGMKKYGHEAAAWVHE
MLAAGNTSFYRIEDGVRKYYDIPTKSYKAVPGAEAFIILDNLRASKVLWKNSGASIIDLG
DGIINVEFHSKMNTIGGDTLQAINKAIDMAEKDYKGLVIGNDGANFSAGANVGMIFMMAV
EQEWEELNMAIRLFQNTSMRIRYSSIPVVVAPHNLTLGGGCEFSLHADHVQLNAETYMGL
VEFGVGVIPGGGGTKEFALRASDEYKDDQIVQNVLKDRFLTIGMAKVSTSAVEAFELGYL
QKGKYAISMNRSRLIADAKAKAIELADAGYTQPVRRKDIKVLGKQGLGIVYAGANTMYSG
HYISEHDKKISEKLGWVMCGGDLSSPTEVTEQYLLDLEREVFLSLCGERKTLERIQSIVT
KGKPLRN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaaaaaaataaatagagtagcggtattgggctctggtattatgggttcgcgc
attgcctgtcactttgccaacatcggcgtagaagtgctgctgcttgatattgccgcaaaa
gaaggagataagaacagtattgtaaatacagcgctgcaaactgcagtaaaaaccaaccct
tctccggtttattcaaaaaaagttctgactaatattgcgaccggaaattttgaagacgat
atgtctaaaattgccgcttacgattggatcatagaggttgtggtagaaaatcttgacatc
aagaaaaaggtgtttgaacaggtagaacagtaccgtaagcctggcacactggttacttca
aatacatcaggaatccccattcatttaatggccgagggcagaacggatgattttaaggcc
aacttttgcggaacacacttttttaatccgccccgctatttaaggttactggaaattatt
cctactccgcatacaagacctgagctggtcgactttttaatgcattatggtgataaattt
ttgggcaagactaccgttttgtgtaaagatacaccggcatttattgccaatcgtgtaggg
gtttattcgattatggccctgctgcacctggtagaaaaaatggaccttaccgtagaggag
gtagacaagtttaccggacctgcattgggtaggccaaaatcggctactttccgcactacc
gatgtggttggcctggataccatgatcaaggtagctaaaggactgtatgacaactgcccg
gatgacaaggcgcatgagctgtttaaactgccgggatatgtagaaaagatggaagccaat
aaatggctgggcgataaaaccggacagggtttttacaaaaaaacaaaatctgccgaaggc
aaaacagaaatactggcgcttgacctgaaaacgatggaataccgtccacaggaaaaagtg
aaatcggctacgctggagctgaccaagccaattgaacaggtacgcgaccggatgaaggtg
tttgcggcaggaaaagataaagcagctgaattgttcagggcctcgttttttgggctgttt
gaatatgtatcggacaggatccctgaaatttcggatgaactgtacagaattgatgatgcc
atgcgtgcgggatttggatgggagctggggccttttgaggtttgggatgctgtaggtgtt
gccgaggccattgaaggcatgaaaaagtatggacacgaggctgcggcctgggtgcatgaa
atgctggcggccggaaatacatcgttttacaggatagaagatggggttcgcaaatattat
gatatcccgactaaaagctataaagcggtgccgggtgcagaggcttttatcattctggat
aacttaagggccagcaaggtgctctggaaaaattcgggggcctctattattgacctgggt
gacgggatcatcaatgtggaattccactctaagatgaataccattggcggcgatactttg
caggccataaataaagccattgatatggcagaaaaagattacaaagggctggtgattggc
aatgacggcgccaatttttcggccggcgccaatgtagggatgatctttatgatggcggta
gagcaggaatgggaagagctgaacatggccatccgcttattccagaatacctctatgcgc
atcaggtattcttctattccggtagtggtagccccgcacaatttaactttgggcgggggt
tgcgagtttagtttgcatgccgaccatgtacagctcaatgctgaaacgtatatgggcctg
gttgagtttggtgtaggggtaattcccggcgggggtggtactaaagagttcgctttgcgt
gcatctgatgaatataaggatgatcagattgttcagaatgtgcttaaggacaggttttta
actataggtatggctaaggtgtctacatcggctgttgaggcttttgagttgggttatctt
caaaaaggcaagtatgctatttccatgaacaggagcaggttaattgctgatgctaaagcc
aaggcaattgaacttgcagatgcgggttatacgcagccggttagacggaaagatattaaa
gtgttgggtaagcagggtttaggtattgtgtatgccggtgccaataccatgtactctggt
cattatatttctgaacatgataaaaagatttcagagaaactgggctgggtgatgtgtgga
ggtgacctttcttcgccaacagaggtaacggaacagtatttactggatttggaaagagaa
gtgtttttatcactttgtggggaaagaaaaacgctggagcgcatccagagtattgtaact
aaaggcaaaccgttaaggaattaa
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