Pedobacter heparinus: Phep_3732
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Entry
Phep_3732 CDS
T00978
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phe
Pedobacter heparinus
Pathway
phe00061
Fatty acid biosynthesis
phe00071
Fatty acid degradation
phe01100
Metabolic pathways
phe01212
Fatty acid metabolism
phe02024
Quorum sensing
phe04146
Peroxisome
Module
phe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Phep_3732
00071 Fatty acid degradation
Phep_3732
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Phep_3732
09145 Cellular community - prokaryotes
02024 Quorum sensing
Phep_3732
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phe01004
]
Phep_3732
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phe04147
]
Phep_3732
Enzymes [BR:
phe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Phep_3732
Lipid biosynthesis proteins [BR:
phe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Phep_3732
Exosome [BR:
phe04147
]
Exosomal proteins
Exosomal proteins of breast milk
Phep_3732
Exosomal proteins of breast cancer cells
Phep_3732
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACU05923
UniProt:
C6XUD0
LinkDB
All DBs
Position
complement(4452567..4454339)
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AA seq
590 aa
AA seq
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MAATVTRVFDLLQYNLEKFPKQEFISGKVNGKWQKYSTQEFSDTVDALSRGLIELGIGKA
SRVAVMSANRPEWNITDFAVMQIGAYHIPLYPTLAEHDVKFILENAEITVIFVADEPLYN
KLKPVCEELKKDIQIYTFDEVKGAGNWQTLVKTGQQKTETDLEAYRSQITPEDILTLIYT
SGTTGTPKGVMLTHNNLVKNFENSAVLLPDGIRKGLSFLPLSHIFERMVVYLYMYCDTAV
YYAESMDTIVADIQFVKPNVFSTVPRLLEKVYEKIMEKGKALTGIKRGIFFWSVALAEKF
EIENSWFYNLKLGIARKLVFKKWQEALGGEIVVIISGGAALNPRLARIFWAAGMPVFEGY
GLTETSPVITVNHFGNTMFGTVGPPINGVEVKIAEDGEVLARGHDIMKGYYLRDDLTAET
IDKDGWFHTGDIGELVNGRFLKITDRKKEIFKTAGGKYVAPQMIENKFKETVLVEQVMVL
GENRKFPAALIVPNFVALKSWAAKKGINYTTDEEMAKNPQVIEKFNQIVLNSGKDFGKWE
QVKRFELLAKPWSIDGGELTPKLSLKRKVILEKYATIIEKIYTDAENYKA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacggtaacaagagtatttgatttacttcaatataatttagagaaatttcct
aaacaggagtttataagtggcaaggtgaatgggaaatggcagaaatacagtacgcaggaa
tttagcgataccgttgatgcattgagcagggggctgatcgagctgggtatcggcaaagca
tcccgggtagccgtgatgtcggcaaaccggcccgaatggaacattacagattttgcagtg
atgcagatcggggcctaccacattcccctttatcctacgcttgcagaacatgatgtaaag
tttatcctcgagaatgcagaaattaccgtcatttttgtggcagatgaacctttgtacaac
aaactaaaaccggtttgtgaggagctgaagaaagacattcagatctatacttttgatgaa
gttaaaggagccggcaactggcagacgctggttaagaccggacagcaaaagaccgaaaca
gaccttgaggcctatcgcagccagattacacccgaagatattttaacgctcatttatacc
tcgggcactacaggtacacccaaaggggtaatgctgacccataataacctggtcaaaaac
tttgaaaattcggctgtgctgcttcctgatgggattcgtaaaggccttagttttttaccc
ctttcgcatatttttgagcgcatggtggtttacctgtacatgtattgtgatacggcggta
tattatgccgaaagcatggacactattgtggccgacatacagtttgtaaaacccaatgtt
ttttctaccgttccgcgcctgctggaaaaggtatatgaaaagatcatggagaaaggcaag
gcacttacagggatcaaaagggggatatttttttggtctgtggccctggccgaaaagttt
gaaattgaaaacagctggttttataacctgaagctgggcattgcccggaaactggtgttt
aaaaaatggcaggaggcccttggtggcgaaattgtagtgatcatttcgggaggcgcggcc
ttaaacccgcgactggccaggattttctgggctgcgggcatgccggtatttgagggctac
ggactcaccgaaacctcaccggtaattacagtgaaccattttggcaataccatgtttgga
acagtaggccctccaattaacggggtagaagttaaaatagcagaagatggagaggtgctg
gcccgtggacacgacattatgaaaggctattatttaagggacgacctgactgccgaaacc
atagataaagatggctggttccatacaggtgatatcggtgaactggtcaatggccggttt
ttaaagatcaccgaccggaaaaaagagatctttaaaactgcaggtggtaaatacgtggca
ccgcagatgatagaaaataagtttaaggaaacggtactggtagagcaggtaatggtacta
ggcgaaaaccgcaaatttccggcagctttaattgtacctaattttgtagctttaaaatca
tgggcagctaaaaaagggatcaattataccacggacgaagaaatggccaaaaatccgcag
gtgatagagaagtttaaccagatagtactgaattccggtaaggatttcgggaaatgggaa
caggtaaagcgctttgaactgctggctaaaccatggagtattgacggtggggagcttacc
cccaagctgagcctgaaaagaaaagttatattggaaaaatacgcaaccattattgaaaaa
atatataccgatgcagaaaactataaggcttaa
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