Pedobacter heparinus: Phep_3755
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Entry
Phep_3755 CDS
T00978
Name
(GenBank) LysR substrate-binding
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phe03000
]
Phep_3755
Transcription factors [BR:
phe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Phep_3755
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_11
HTH_30
MarR_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACU05946
UniProt:
C6XUT8
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Position
complement(4500217..4501101)
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AA seq
294 aa
AA seq
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MEIRQINYFIKAAEMLHFTEAAAACFVTQSTLSQQIKQLEEELGMLLFDRVGKHVRLTEA
GNVYLKHARQIVLDVKKSKQAILELNNLVTGDLKIGVTYAFSSMLLPALAPFSSKYPGIK
IVVEYGTAGELEHNLKQAELDVILAFHDQTDNDNVSLEMEHLFSSRISMVVSKKHPLAGL
KKISLNELAKVELILPSKGFSSRDLLNELFRKRKLSPLIKIEMNDVHSLLSMVDEGNWAT
IINEKAILTWENLIAIPISGKEYYKQAFILWQKGIYRKKSATLFVDELIKTLLG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggaaataagacagatcaactattttattaaagctgccgaaatgctgcactttactgaa
gccgcggcagcttgctttgtaacgcaatctaccctttcccagcaaattaaacagctggaa
gaggagctgggtatgttgttgttcgacagggtggggaagcatgtacgtttaaccgaagca
ggaaatgtttaccttaagcatgcccgtcaaattgtgctggatgtaaaaaaatcaaagcag
gccatccttgaactgaacaatctggtaacaggagatttaaagattggggttacttatgcc
tttagttccatgttgctgcccgccctggcacctttctcttccaaatatcccggaattaaa
attgtggttgaatatggaacagccggagaactggagcataacctgaaacaggccgaactg
gatgtgatccttgcttttcacgatcagacggacaacgacaatgtaagcctggaaatggaa
catctcttttcttccaggatttcgatggtggtttcaaaaaaacacccccttgcaggcctt
aaaaagatctcgctgaatgagctggccaaagtagaactgatcctgcccagcaagggcttt
agttccagagatctgctcaatgaactgttcaggaaaagaaaactcagcccgctgatcaaa
attgaaatgaatgatgtacactccctgctttccatggtagatgaagggaactgggctacc
atcatcaatgaaaaggccatccttacctgggaaaatctgatcgccatccccatctccggc
aaggaatattataaacaagcctttatcttatggcaaaaaggaatatacagaaaaaaatca
gccaccctttttgtcgatgagctgattaaaaccttattgggctag
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