Pedobacter heparinus: Phep_3778
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Entry
Phep_3778 CDS
T00978
Name
(GenBank) small GTP-binding protein
KO
K03977
GTPase
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phe03009
]
Phep_3778
Ribosome biogenesis [BR:
phe03009
]
Prokaryotic type
GTPases
Phep_3778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
SRPRB
ABC_tran
AAA_22
Ras
PduV-EutP
Arf
AAA_16
TniB
AAA_18
cobW
nSTAND3
AAA_24
Guanylate_kin
ATPase_2
NB-ARC
DUF5906
NTPase_1
URGCP_GTPase
Ligase_CoA
Motif
Other DBs
NCBI-ProteinID:
ACU05969
UniProt:
C6XUW1
LinkDB
All DBs
Position
4531025..4532326
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AA seq
433 aa
AA seq
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MSNIIAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYGVAEWTDKQFTVIDTGGY
VANSEDVFEAAIREQVIIAIEEATVLLFMVDVTTGITDLDDEIAQLLRRSKKPVFIVVNK
VDNTQLQNDAAVFYGFGLGEIHPISSMTGSGTGDLLDEVIKHFEDVPEEENALPKITIVG
RPNVGKSSLINALMGKERNIVTPIAGTTRDSIHIHYNQFGHEFMFIDTAGLRKKTKVKEN
IEFYSVMRTIKALEEADVVILMIDAMEGLESQDVNIFHLAEKNKKGIVILVNKWDLVEKN
SKTVNIFEDQIRQKLQPFTDIPIIFISALNKQRIFQAVETALDVFKNRGKKIPTSKLNDV
MLPIIENYPPPALKGKYIKVKYITQINASSPMFAFFCNLPQYIKEPYKRFIENKLRENFD
FSGVPIQIYFRQK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatattattgcaattgtcggaagaccaaacgtaggcaaatctaccctttttaac
cgcttaacagaaagtcgtaaagccattgttgatgattttagcggggtaacacgcgaccgt
cattatggtgtagccgagtggacagacaaacagtttacggttattgatacaggtggttat
gtggccaattcggaagatgtttttgaagctgccatccgtgagcaggtgatcattgccata
gaagaagctactgtactgctttttatggttgatgtaaccacaggcattaccgacctggac
gatgagattgcccaattgctcaggagaagtaaaaaacctgtattcattgttgtgaacaag
gttgacaacactcagctgcaaaacgatgccgcagtattttatggttttggcctgggtgag
atccaccccatatcttctatgacaggatcaggcaccggagacctgcttgatgaggtgatc
aaacactttgaagatgttcctgaagaagaaaatgcattgcctaagatcaccattgttgga
aggccaaatgtgggtaagtcttccctgatcaatgctttgatgggcaaagaaagaaatatc
gtgacccctattgccggcacgacaagggattccattcacattcattacaaccagtttggt
catgaatttatgttcattgacactgccggcctccgtaaaaaaaccaaggttaaggaaaat
atagaattttactcggtaatgcgtaccattaaggcgcttgaagaggccgatgttgtgatc
ctgatgatagatgccatggaaggtctggaatcgcaggatgtaaacatttttcaccttgcc
gagaaaaacaagaaaggtattgttatcctggtcaacaaatgggacctggtagagaaaaac
agcaaaactgtaaatatctttgaagatcagatccgccagaaactacagccctttaccgat
attcccatcatctttatttccgcattaaataagcaacgtattttccaggccgtagaaact
gcactggatgtatttaaaaacaggggcaagaaaatacccacatcaaaattaaatgatgtg
atgctgcctatcatcgaaaactatcctccaccagcattaaaagggaagtacattaaagtc
aagtacattacccagatcaacgcaagctcccctatgtttgcattcttctgtaaccttccg
caatacattaaagaaccctataaaaggtttattgaaaacaagctgcgtgaaaattttgat
tttagcggggtgcctatccagatctatttcagacaaaaatag
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