Pedobacter heparinus: Phep_3797
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Entry
Phep_3797 CDS
T00978
Name
(GenBank) Heparinase II/III family protein
KO
K19052
heparan-sulfate lyase [EC:
4.2.2.8
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Phep_3797
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.8 heparin-sulfate lyase
Phep_3797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_N
Hepar_II_III_C
Motif
Other DBs
NCBI-ProteinID:
ACU05988
UniProt:
Q59289
Structure
PDB
PDBj
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All DBs
Position
4555892..4557904
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AA seq
670 aa
AA seq
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MLTINLNLKDCMTTKIFKRIIVFAVIALSSGNILAQSSSITRKDFDHINLEYSGLEKVNK
AVAAGNYDDAAKALLAYYREKSKAREPDFSNAEKPADIRQPIDKVTREMADKALVHQFQP
HKGYGYFDYGKDINWQMWPVKDNEVRWQLHRVKWWQAMALVYHATGDEKYAREWVYQYSD
WARKNPLGLSQDNDKFVWRPLEVSDRVQSLPPTFSLFVNSPAFTPAFLMEFLNSYHQQAD
YLSTHYAEQGNHRLFEAQRNLFAGVSFPEFKDSPRWRQTGISVLNTEIKKQVYADGMQFE
LSPIYHVAAIDIFLKAYGSAKRVNLEKEFPQSYVQTVENMIMALISISLPDYNTPMFGDS
WITDKNFRMAQFASWARVFPANQAIKYFATDGKQGKAPNFLSKALSNAGFYTFRSGWDKN
ATVMVLKASPPGEFHAQPDNGTFELFIKGRNFTPDAGVFVYSGDEAIMKLRNWYRQTRIH
STLTLDNQNMVITKARQNKWETGNNLDVLTYTNPSYPNLDHQRSVLFINKKYFLVIDRAI
GEATGNLGVHWQLKEDSNPVFDKTKNRVYTTYRDGNNLMIQSLNADRTSLNEEEGKVSYV
YNKELKRPAFVFEKPKKNAGTQNFVSIVYPYDGQKAPEISIRENKGNDFEKGKLNLTLTI
NGKQQLVLVP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccattaatctaaatcttaaagattgcatgactacgaaaatttttaaaaggatc
attgtatttgctgtaattgccctatcgtcgggaaatatacttgcacaaagctcttccatt
accaggaaagattttgaccacatcaaccttgagtattccggactggaaaaggttaataaa
gcagttgctgccggcaactatgacgatgcggccaaagcattactggcatactacagggaa
aaaagtaaggccagggaacctgatttcagtaatgcagaaaagcctgccgatatacgccag
cccatagataaggttacgcgtgaaatggccgacaaggctttggtccaccagtttcaaccg
cacaaaggctacggctattttgattatggtaaagacatcaactggcagatgtggccggta
aaagacaatgaagtacgctggcagttgcaccgtgtaaaatggtggcaggctatggccctg
gtttatcacgctacgggcgatgaaaaatatgcaagagaatgggtatatcagtacagcgat
tgggccagaaaaaacccattgggcctgtcgcaggataatgataaatttgtgtggcggccc
cttgaagtgtcggacagggtacaaagtcttcccccaaccttcagcttatttgtaaactcg
ccagcctttaccccagcctttttaatggaatttttaaacagttaccaccaacaggccgat
tatttatctacgcattatgccgaacagggaaaccaccgtttatttgaagcccaacgcaac
ttgtttgcaggggtatctttccctgaatttaaagattcaccaagatggaggcaaaccggc
atatcggtgctgaacaccgagatcaaaaaacaggtttatgccgatgggatgcagtttgaa
ctttcaccaatttaccatgtagctgccatcgatatcttcttaaaggcctatggttctgca
aaacgagttaaccttgaaaaagaatttccgcaatcttatgtacaaactgtagaaaatatg
attatggcgctgatcagtatttcactgccagattataacacccctatgtttggagattca
tggattacagataaaaatttcaggatggcacagtttgccagctgggcccgggttttcccg
gcaaaccaggccataaaatattttgctacagatggcaaacaaggtaaggcgcctaacttt
ttatccaaagcattgagcaatgcaggcttttatacgtttagaagcggatgggataaaaat
gcaaccgttatggtattaaaagccagtcctcccggagaatttcatgcccagccggataac
gggacttttgaactttttataaagggcagaaactttaccccagacgccggggtatttgtg
tatagcggcgacgaagccatcatgaaactgcggaactggtaccgtcaaacccgcatacac
agcacgcttacactcgacaatcaaaatatggtcattaccaaagcccggcaaaacaaatgg
gaaacaggaaataaccttgatgtgcttacctataccaacccaagctatccgaatctggac
catcagcgcagtgtacttttcatcaacaaaaaatactttctggtcatcgatagggcaata
ggcgaagctaccggaaacctgggcgtacactggcagcttaaagaagacagcaaccctgtt
ttcgataagacaaagaaccgggtttacaccacttacagagatggtaacaacctgatgatc
caatcgttgaatgcggacaggaccagcctcaatgaagaagaaggaaaggtatcttatgtt
tacaataaggagctgaaaagacctgctttcgtatttgaaaagcctaaaaagaatgccggc
acacaaaattttgtcagtatagtttatccatacgacggccagaaggctccagagatcagc
atacgggaaaacaagggcaatgattttgagaaaggcaagcttaatctaacccttaccatt
aacggaaaacaacagcttgtgttggttccttag
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