Pedobacter heparinus: Phep_3806
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Entry
Phep_3806 CDS
T00978
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
phe
Pedobacter heparinus
Pathway
phe00730
Thiamine metabolism
phe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Phep_3806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phe03009
]
Phep_3806
Enzymes [BR:
phe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Phep_3806
Ribosome biogenesis [BR:
phe03009
]
Prokaryotic type
GTPases
Phep_3806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
MMR_HSR1
GTP_EFTU
FeoB_N
AAA_29
ABC_tran
eIF-1a
AAA_23
nSTAND1
AAA_16
Septin
AAA_7
AAA_15
DUF842
nSTAND3
MMR_HSR1_Xtn
CusF_Ec
Motif
Other DBs
NCBI-ProteinID:
ACU05997
UniProt:
C6XUY9
LinkDB
All DBs
Position
4573333..4574253
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AA seq
306 aa
AA seq
DB search
MQGLVIKSTGSWYQVHAENGLDYDCRIKGKFRIQGIQTTNPVAVGDRVEFELEPNSDNGI
INKLYDRRNYIIRKSINLSKQAQIIAANMDQAFLVVTLASPRTSLGFIDRFLATAEAYDI
PAMLIFNKLDLFHEEGLEILAEYQGIYENIGYPCYSVSALKGTNIPLIESLLKDKTTLFS
GHSGVGKSSLINALLPGHSIKTGEISGSSDKGQHTTTFAEMHALPFGGYLIDTPGIRELG
IFDIRPEELGHYFREMRDLMHQCKFNNCRHVNEPGCAVIKAVESGEIELSRYESYLSIYH
GNETRA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggattagtaataaaatcgaccggtagctggtatcaggtgcatgctgaaaatggc
ctggactatgattgccgtataaaaggtaagttcaggatacagggcatccaaaccactaat
cctgttgcagtgggcgaccgtgtggagtttgaactagaaccaaattcggacaacggcatc
atcaataagctatacgacagacggaattacatcatccgaaaatcgattaacctgtctaaa
caggcccagatcattgcggccaatatggaccaggcttttttagtggttacgctggcttct
ccccgtacttcactgggttttatcgatcgttttctggccactgccgaggcttatgatatc
cctgctatgctgatatttaacaagcttgacctttttcatgaagaagggctggaaatactg
gccgagtaccaaggcatttatgaaaatattggttacccctgttattcggtttctgcactt
aagggcacaaacatccctttgatcgaatctttgttaaaagacaagacgactttattttca
ggacattcaggtgtaggaaaatcgagcctgatcaatgccttattgcccgggcacagcatt
aaaacaggtgaaatttcgggatccagtgataaagggcagcataccactacttttgccgaa
atgcatgccttaccttttggtggttacctgattgataccccgggcatacgtgaactgggt
atatttgacatcagacctgaggaactcggacattatttcagggaaatgagggatttgatg
caccaatgtaagtttaacaattgccggcatgtaaacgagcctggctgtgccgtaattaaa
gctgtagaaagtggggaaatagaactgagcagatacgaaagttacctgagtatttatcat
ggtaacgaaaccagggcttaa
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