Pedobacter heparinus: Phep_3859
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Entry
Phep_3859 CDS
T00978
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
phe
Pedobacter heparinus
Pathway
phe00260
Glycine, serine and threonine metabolism
phe00460
Cyanoamino acid metabolism
phe00630
Glyoxylate and dicarboxylate metabolism
phe00670
One carbon pool by folate
phe00680
Methane metabolism
phe01100
Metabolic pathways
phe01110
Biosynthesis of secondary metabolites
phe01120
Microbial metabolism in diverse environments
phe01200
Carbon metabolism
phe01230
Biosynthesis of amino acids
phe01240
Biosynthesis of cofactors
phe04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Phep_3859
09102 Energy metabolism
00680 Methane metabolism
Phep_3859
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Phep_3859
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Phep_3859
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Phep_3859
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Phep_3859
Enzymes [BR:
phe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Phep_3859
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Gene cluster
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ACU06050
UniProt:
C6XV42
LinkDB
All DBs
Position
complement(4629943..4631214)
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AA seq
423 aa
AA seq
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MTRDTLIFDLIDRELDRQENGLELIASENFVSKQVMEAAGSCLTNKYAEGLPGKRYYGGC
QVVDQVESIAIERAKKLFGAEWVNVQPHSGAQANAAVMLAVIQPGDKILGFDLSHGGHLT
HGSPVNFSGKLYHPLFYGVKKEDGRIDYAKLEEVALAERPKLIIVGASAYSREWDYAFVR
SVADKIGALVMADISHPAGLIARGLLQNPLPHCHIVTTTTHKTLRGPRGGMIMMGKDFEN
PFGLKTPKGETRMMSSVLDMAVFPGTQGGPLEHIIAAKAIAFGEALSDEYLAYVKQVQAN
AQAMAKAFVAKGYGIISGGTDNHLMLIDLRNKNITGKLAESALEKADITVNKNMVPFDDK
SPFVTSGIRVGTAAITTRGFKESEMEQIVELIDQVLTNAEDENNLKEVKEKVISLVSRFP
LYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactagagatactttaatttttgatttgattgacagggaattggaccgtcaggaaaat
ggtcttgaactgattgcatctgaaaactttgtaagcaaacaggtaatggaagccgcaggt
tcttgtttaactaataaatatgccgaaggccttccgggtaaaaggtattatggtggatgc
caggtggttgatcaggtagagagcattgcaattgagcgtgctaaaaaactttttggtgca
gagtgggttaacgtacaaccgcattcaggtgcgcaggcaaatgctgcagtaatgctggca
gtgatccagccaggcgataagatccttggttttgacctctctcatggcggacaccttaca
catggttcaccggttaacttttcaggaaaattgtatcatccgttattttatggtgtaaag
aaagaagatggaagaatagactatgccaaactggaagaagttgctttggctgagcgtcct
aaactgatcattgttggtgcttcagcttattcaagggaatgggattatgcttttgtacgt
agtgtagcagataaaatcggcgcattggtaatggcagatatctctcatcctgcaggctta
attgcccgtggattgttacaaaatccacttccacactgtcatatcgtaaccacaaccaca
cataaaactttacgtggtccgcgtggtggtatgatcatgatgggtaaagattttgaaaac
cctttcggattaaaaacccctaaaggtgagacccgtatgatgtcttcagttttggatatg
gcggttttcccgggaacacagggtggcccgcttgaacacatcattgcagctaaggccatc
gcctttggtgaagcgttaagcgatgaatatttagcttatgtaaaacaggtacaggcaaat
gcacaggctatggccaaagcttttgtagctaaaggctatggcatcatttcaggtggtacg
gataaccatttaatgctgatcgacctgcgtaataaaaatatcaccggtaaactcgctgaa
agtgcattggaaaaagcagatattaccgtaaataaaaatatggttccgtttgatgacaaa
tcaccatttgtaacttctggaatcagggtaggtacagctgctattactaccagaggtttc
aaagaatccgaaatggagcagatcgttgaactgattgatcaggttctgaccaatgcagaa
gatgaaaataatttgaaagaggtaaaagaaaaagtgataagtttagtaagccgtttccca
ttgtataaataa
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