Pedobacter heparinus: Phep_3860
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Entry
Phep_3860 CDS
T00978
Name
(GenBank) deoxyxylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
phe
Pedobacter heparinus
Pathway
phe00730
Thiamine metabolism
phe00900
Terpenoid backbone biosynthesis
phe01100
Metabolic pathways
phe01110
Biosynthesis of secondary metabolites
Module
phe_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Phep_3860
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Phep_3860
Enzymes [BR:
phe01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
Phep_3860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
E1_dh
RebB
Motif
Other DBs
NCBI-ProteinID:
ACU06051
UniProt:
C6XV43
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All DBs
Position
4631309..4633237
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AA seq
642 aa
AA seq
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MEDINGLFLPNINYPADLKQYKEQDLEQIAQELRQYIIDVVSVNGGHFAASLGVVELTVA
LHYVLNTPYDKLVWDVGHQAYGHKILTGRKDVFHTNRILNGISGFPKISESEYDTFGVGH
SSTSISAALGMAVASHYKGETDRQHVAVIGDGAMTAGLAFEGLNHAGIENSNLLVILNDN
CMSIDPNVGALKEYLTNITTSKSYNRFREDISQVLFKLSELGPNAHKFVKKIEKSIKGTL
LKQSNMFEALNFRYFGPVDGHDVQRLVQVIRDLKDIPGPKLLHCVTLKGKGFALAEKDQT
KWHAPGLFDKITGEIKKSVSDKPQPPKYQDVFGHTLVELAEANKKIVGITPAMPSGSSMN
IMMKAMPNRAFDVGIAEQHAVTFSAGLATQGLVPFCNIYSSFMQRAYDQVIHDVAIQNLN
VIFCLDRAGLAGADGATHHGAYDLAYMRCIPNMTVAAPMNEEELRNLMFTAQQENAGPFS
IRYPRGNGVMPDWKRPFKALEIGKGRKICDGEQVAILTIGHVGNFAVAACKELNSEGIHP
AHYDMRFVKPIDEALLHDVFKRYKNIVTVEDGCLQGGMGTAVLEFMADHQYSAQVIRLGI
PDEFIEHGEQAELWALCGYDTHSIISTIKKIAVGRTTETMAS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattaacggcctgtttttacccaacataaattatcctgctgatttaaagcag
tataaagaacaagatctggaacaaattgctcaggaattacgtcagtacatcattgacgtg
gtgagcgtaaacggcggacattttgccgccagtttaggtgttgtggaattaacggtcgct
ttacactatgtattgaacacaccttacgacaagctggtctgggatgttgggcaccaggca
tatgggcacaaaatactaaccggaagaaaagacgtatttcataccaaccgtattttgaat
ggcatcagtggctttccaaagatcagcgaaagtgaatacgatactttcggcgtaggccac
tcctccacttccatttctgctgctttaggtatggctgtagcttcacactataagggagaa
acagaccgccagcacgtagctgtaattggcgatggggcaatgaccgcaggtcttgctttc
gaaggcttaaaccatgcgggcatcgaaaattcgaacctgctggtaattttgaatgacaac
tgcatgtcgatagaccctaatgttggcgctttaaaagaatatttaacaaacattacaacg
tccaaatcatataaccgctttcgcgaggacatctcgcaggtattgttcaaactttctgaa
ctggggccaaatgcacataagtttgtaaagaaaatagagaagagcattaaaggtacattg
ctgaaacagagcaatatgtttgaggcactgaacttcaggtattttggtccggttgacggg
catgatgtacaacggttggtacaggtgatcagagatttaaaagacattcccggccctaag
cttctacactgtgttactttgaaaggcaaaggttttgccctggccgaaaaagaccagacc
aaatggcatgcaccaggtttatttgacaagatcaccggtgagatcaaaaaatctgtatct
gataaaccccagcctccaaagtatcaggatgtttttgggcatacccttgttgaactagcg
gaagccaataaaaaaatagtagggattacccctgccatgccctccggctcatcaatgaac
atcatgatgaaggcaatgccgaaccgtgcttttgatgtgggtattgcggaacagcatgcg
gttacgttttcggcaggactggcaacacaagggcttgtaccgttttgtaacatctattcg
agctttatgcagcgggcttacgaccaggtgatccatgatgtagccatacagaatttaaat
gtaatattttgcctcgaccgtgcgggcctggccggagcagacggtgccacacaccatggg
gcttatgacttggcctatatgcgctgtatccctaacatgactgttgcagcccccatgaac
gaagaagaattgcgcaacctgatgtttacagcgcagcaggaaaatgctggccctttttct
atccgttaccccaggggaaatggtgtaatgcccgactggaaaaggccatttaaagccctt
gaaattggtaaaggcaggaaaatatgtgatggcgagcaagttgcgatactgaccattggg
catgtaggaaattttgctgtggcagcttgcaaagaactgaacagtgaaggcatacatcct
gcccattatgatatgcgctttgtgaagcccattgatgaggctctgctgcacgatgtattt
aaacgttacaaaaacattgttacagttgaagatggttgtttacaaggtggaatgggtact
gcggtacttgaattcatggccgaccatcaatacagcgcacaggtaatcagactgggcata
cctgacgagtttattgaacatggagagcaggctgagctatgggcactttgtggttatgac
acccattcgatcatcagcacaataaaaaaaattgcagtaggcagaacaactgaaacaatg
gcctcttag
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