Pedobacter heparinus: Phep_4001
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Entry
Phep_4001 CDS
T00978
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
phe
Pedobacter heparinus
Pathway
phe00051
Fructose and mannose metabolism
phe00541
Biosynthesis of various nucleotide sugars
phe01100
Metabolic pathways
phe01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
Phep_4001
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Phep_4001
Enzymes [BR:
phe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
Phep_4001
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
T_hemolysin
NmrA
Big_4
KR
Motif
Other DBs
NCBI-ProteinID:
ACU06192
UniProt:
C6XVW7
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All DBs
Position
complement(4831318..4832454)
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AA seq
378 aa
AA seq
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MKVALITGVTGQDGAYLAEFLLKKGYFVHGLKRRSSSFNTDRIDHLYQDQHEKGVNFKLH
YGDLTDSTNLIRIIQETQPDEIYNLAAMSHVKVSFEMPEYTANADGIGTLRLLEAVRILG
MEKKTKIYQASTSELYGLVQAVPQSESTPFYPRSPYAVAKMYAYWITVNYREAYQMYACN
GILFNHESPLRGETFVTRKITRAACKIALGLQSCLYLGNLSAQRDWGHAKDYIEAMWLIL
QQEKPEDYVIATGITTTVRDFVKMSFAELGIEVEFSGKDQYERGVIIDVDQEMVVKLGLN
DANLKPGTVVVQVDEKYFRPTEVDLLLGDPTKANTKLGWKPKYDLPLLVEDMIQSDLQLM
KKDEYLKQGGFKTLNYFE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcgttaataaccggtgttaccggacaggatggagcatatctggcagagttt
ttacttaaaaaaggatattttgtccacggtttaaaaagacggtcctcatcgtttaatacg
gaccggattgatcatttgtaccaggaccagcatgagaaaggtgtaaattttaaattgcat
tacggtgatttaaccgactccaccaatctgatccgtatcattcaggaaacgcagcctgat
gaaatctataacctggcagctatgagccatgtaaaggtaagttttgaaatgcctgaatat
actgcgaatgccgatggtataggtacattaaggctattggaagctgtacgtattctaggt
atggaaaaaaagaccaaaatataccaggcctctacttcggaactgtatggtttggtccag
gcggtaccccaaagtgaaagtaccccattttatccgcgttcaccttatgctgtagcaaag
atgtatgcctactggattacagtaaattacagggaagcttatcagatgtatgcttgtaac
ggtattctttttaaccatgaaagtcccttaagaggggaaacttttgttacacgtaaaatt
acccgcgcggcctgtaagatcgcattgggcctgcaaagctgtttatatctcggcaacctg
tcggcgcagcgcgactggggccatgccaaggattacattgaggccatgtggctgatcctc
cagcaggaaaagccagaagattacgtaattgctaccggaataaccacaacagtaagggat
tttgtgaaaatgagttttgctgaactgggtatagaagttgaatttagtggcaaggaccag
tacgaaaggggtgtaattattgatgtagaccaggaaatggttgtaaagctaggtttaaat
gatgccaatctgaaaccgggcactgttgtggtgcaggtagatgaaaaatatttccgccct
actgaggttgacctgctgttgggcgacccgaccaaggccaatacgaaactgggttggaaa
cctaagtacgatttaccacttttggtggaagacatgatccagtcagatctgcaactgatg
aaaaaagatgaatacctgaaacaaggtgggtttaaaacacttaattatttcgagtag
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