Pedobacter heparinus: Phep_4010
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Entry
Phep_4010 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_4010
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_4010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACU06201
UniProt:
C6XVX6
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All DBs
Position
complement(4850033..4851475)
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AA seq
480 aa
AA seq
DB search
MKAIIYIPLVALLSLSVSCKKFVDIDPPRTELSSESLFVNDKTATSAMVGIYSDMNSYNY
FYANLLTMFMGGMGSDEFTYALTSTAEFEEFKNNNVLSTNRFVGQLWSEPYAYNYRANAV
IEGVTASQTLSPQVKNQLLGEAKFMRAFFHFYLVNTFGDVPLILDTDVQKNTNLSRTPAA
EVYKSIIADLIDAKNLLAINYPSTGERTRPTKGAATLLLARAYLYTGNNVQAEIEAAEVI
SNPNYQLLQGANMNKTFLANSPEAIWQLQVVNNGGSRNTWEGFTMTPASITAPVAYYRLT
KGAGGLVDAFEPGDLRRTNWTGSYTTTATPPLTHTYPYKYKIRTNPGPITEYSMVLRYAE
AYLIRAEARIQLNKLDLGKQDLDVIRSRAGFSTPLPSIASIPAGMLRVEQERRVELFTEW
GHRWFDLKRWKSVSGDATKTRADDVLPLTKPSWKSTAILMPIPSDARKTNPNLTPNPGYN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctattatatatatccccttggttgctttgcttagtctgagtgtatcctgcaaa
aaatttgtggacatagatccaccgagaacagaactttcttctgaaagtctgtttgtgaat
gataaaactgcgacatcagcaatggtgggcatttattcagatatgaattcttataattat
ttctatgctaatttattgacaatgtttatgggagggatgggctcagatgagtttacttat
gccctgacatcaacagcggaatttgaggaattcaaaaacaataatgtgttgtctaccaat
cgttttgtagggcaactgtggtctgagccttacgcttataattacagggccaatgctgtt
attgagggtgtaaccgcttctcaaactttaagtcctcaagttaaaaatcaattactgggc
gaagccaagtttatgcgtgcatttttccatttttatcttgtaaatacttttggggatgtt
ccgttgattttggatacggacgttcagaaaaataccaatttatctagaacacctgctgca
gaggtttataagtctattattgcggatcttatcgatgcaaaaaatctattagctatcaat
tatccatccacaggagaaaggacacgtcctacaaaaggggctgccaccttgttgcttgcg
cgtgcctacttgtatacagggaataacgtacaggcggagatagaagcagcagaagtcatc
agtaaccctaattaccagttgctacagggagctaacatgaataaaacctttttagcaaac
agcccagaagcaatatggcaactacaggtggtgaacaatggcggaagcagaaatacctgg
gaaggttttaccatgacacctgccagtattactgcccctgtagcgtactaccgtttaaca
aaaggtgctggtggccttgttgatgcatttgaaccaggagatctgcgcaggacaaactgg
acaggtagctataccactacggcgacacctcctttaacccatacctatccttataaatat
aaaataaggactaacccgggcccgataacagagtattctatggttttacggtatgctgag
gcctatctgatccgtgctgaagcaaggatacaactgaataaactagacttaggtaaacaa
gatcttgatgtgatccgtagccgtgcaggatttagtaccccattgccttcaattgcatcc
atacctgcaggtatgttgcgggttgaacaagagcgcagggtagaattgtttacagagtgg
gggcatcgctggtttgacctgaaaagatggaaaagtgtaagtggtgatgctactaaaaca
cgtgcagatgacgttttaccacttaccaaaccttcatggaaatcaacagccatcttgatg
cccatcccttctgatgcccggaagaccaatcctaatttaactccaaaccctggctacaac
taa
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