Pedobacter heparinus: Phep_4100
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Entry
Phep_4100 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_4100
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_4100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACU06291
UniProt:
C6XWK2
LinkDB
All DBs
Position
complement(4942804..4944720)
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AA seq
638 aa
AA seq
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MKYAIKRQWCLKVAILIVISGLSSCKKYLDIIPDNVATIDNAFAMRSEAEKYLYTCYSYM
PKDGSLDQDPSILGGDEIWAIDRPPKPNFNHGIFEIAMGRQATVNPVGEFIWVNLYKGLR
DCNIFLENVERVPDLKPEEKREWIAEVKFLKAYYHFYLVRMYGPIPLIKENLPVDVNISS
VKITRAPVDSCFAYIKQLLDESKDVLQPTINDPVKMLGRITKPIVYSLKAKVMVTAASPL
FNGNADQASLKNADGTQLFNQQVVPAKWDSAVVACKQAIDVCEAAGLKLYEFNAASSTFV
LSDQMKLQLSLRNAFAEKWNSEIIWANTQSLSANIQLNATPNVNPLYQDNPFIGYELAPP
LKIVDMFYTENGVPTTEDRTWNLNQPATRAGTVEDQRLIKLNYETSSVNFDREPRFYANL
GFDGGIWYGQGYFNDAVPASTYYVMAKKGQQNGKGKPDYGSVTGYFIKKYVHYQNTQGSA
MTDYSVNNYPWPLIRLSQLYLLYAEALNEKSGPVAEVHTYINKVRARAGLKSVKESWDLY
ANNTKYTTQAGMKDIIHRETLIELAFEGARFWDLRRWKEAPQEYIKPIQGWDIEQSTANL
YYRRKLVFTPRFSMKDYFWPIRDNNILNNKNLIQNIGW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgctataaaaaggcagtggtgcttaaaagttgccatccttattgttatttcc
ggattaagttcctgtaaaaaatatctggacattatccctgataacgtcgcaaccatagac
aatgcatttgcgatgcgctcagaagcggaaaaatacctctatacctgttattcttacatg
ccaaaggatggtagcctagaccaggacccttcaattttaggtggcgatgaaatatgggca
attgaccgtccgccaaaaccaaatttcaaccatggaatttttgaaattgcaatggggcgt
caggctacggttaatcctgtcggagaatttatttgggtaaacctctataaaggcttgcgc
gactgtaacatcttcctggaaaatgtagagagggtacccgaccttaagccagaagaaaaa
agagaatggattgctgaggtcaaattccttaaagcttattaccatttttatctggtacgt
atgtatgggccaattccgctgatcaaagagaatttgccggttgatgtaaacatctcctct
gtgaaaattaccagagcacctgtagacagctgttttgcttatatcaagcaattgctcgat
gaatcaaaagatgtattacagcctaccatcaatgatccggttaaaatgctgggccgtatc
accaaacctattgtgtattctttaaaggctaaagttatggtaacggctgcaagcccattg
tttaatggaaatgccgatcaggccagtttaaaaaacgctgatgggacacaactatttaac
cagcaggtggttcctgctaaatgggattcggctgtagtagcctgtaaacaggcaatagac
gtatgcgaggcagcagggttaaaactgtatgagttcaatgcggcttcatcaaccttcgtg
ttgtcggatcagatgaaattgcaactcagcttaagaaatgctttcgcagaaaaatggaat
tctgaaattatctgggcaaatacccaaagcctttcagctaacatccagttaaatgcaaca
cctaatgtcaacccattataccaggacaatcccttcattggatacgaactggccccgccg
ttaaaaatcgtagacatgttttacaccgagaatggcgtacctacaacggaagataggacc
tggaacctgaaccagccagctacaagggcaggtacggttgaagatcagcggctcattaaa
ttaaattatgaaacctcctctgtcaatttcgaccgtgagccacgtttttatgccaatctg
ggctttgatgggggcatttggtacggacagggttattttaatgatgcagtacctgcaagt
acatattatgtaatggccaaaaaggggcagcaaaatggtaaaggaaaaccagattatggt
tcggtaactggctattttattaaaaaatacgtgcattatcaaaatacccagggtagtgca
atgaccgattatagcgtcaacaattatccgtggccgttaatccgtttgtcgcaattatat
ctgttatatgcagaagcactgaatgagaaaagcggacctgttgcagaagtacatacttat
atcaataaagtacgtgcccgggctggtctcaaatcagttaaagaatcctgggatctgtat
gcaaataataccaagtacacgactcaggccgggatgaaagatattatccacagggaaacc
ttaatagagcttgcttttgaaggtgcccgtttctgggatcttagaagatggaaagaagct
cctcaggagtatatcaagccgattcagggatgggacatcgagcagtctactgcaaattta
tactaccgcagaaaactggtgtttacacccagattttcaatgaaagactatttctggccg
attcgtgataacaatatcctgaacaataagaatttaatccaaaatattggttggtaa
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