Pedobacter heparinus: Phep_4138
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Entry
Phep_4138 CDS
T00978
Name
(GenBank) RagB/SusD domain protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_4138
Transporters [BR:
phe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Phep_4138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ACU06329
UniProt:
C6XWP0
LinkDB
All DBs
Position
complement(5002470..5004308)
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AA seq
612 aa
AA seq
DB search
MRYFRYIYSLVTVTVLFVSCNKEVLDRPPQSSYRNDNFWRNEDDLRLYANGFYANYFNGY
NTSFTVDYTPVRGYTFSDDLTSKNVQAAFESSVPTTRGSTSEVADWLGTYAGPTWDFAWV
RKANLFLNRIDNVTKPNLSDDAYKHWTAVARFFRAYEYCRLVSVFGDVPYFDKDIEESDL
PTMYKDRDDRGLVMDKVYDDFKYVMANMRESDLNVQNLNRYVAASFISRFMLFEGTFQHY
HNLDAARAKKYLEFAVEAGNYVMAGKWTFGSDYKALFSSDNLSGNPEVIFYRTYDAGLGI
MHSIGSYNNGTEVPGVDANLVFIKSFIVNDGKVWQNSAVPNASSFAIADLVKTRDPRFEA
SFIDRALGTSATLLYSFKYASREAITYIGKSYPAAWGSNTNTSDAPVMRLGEVVLNWIEA
KAELATYYGGAAVGQGDIDKSINAIRNRPVDAVAVGKGVVKTAPLSLAALPTDPARDGDV
PALIWEIRRERRMELMLEHSRLLDLKRWKKLSNMNFTNPDYLMGPWVNVQAEVPAFLTAA
NATAKTVKVRKLDGTVVTYDGTNAAAMVGFWMVTGAANRNAFTDRAYLAPVGQTQIVQYQ
EKGYKLTQTKLW
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagatattttagatatatatatagcctggttacagtaacagttttatttgtttcttgt
aataaagaggtgttagacagacctccacagtcttcttacagaaatgataatttctggagg
aacgaagatgatcttcgtttgtatgctaatggtttttatgccaattattttaatggatat
aataccagttttactgttgattatacaccggtaaggggatacacattttcagatgacctg
accagtaaaaacgtacaggcagcttttgaaagcagtgtgccaactacaagagggtctaca
tccgaagttgcagattggttaggtacgtatgcgggccctacctgggatttcgcctgggtc
cgtaaggcgaatctgttccttaaccggatagataatgttaccaagccaaatctttctgat
gatgcctataaacactggactgcggtggcaaggtttttccgtgcatatgaatactgccgt
ttggtaagtgtgtttggggatgtgccttattttgataaggatattgaagagagtgacctg
cctaccatgtacaaagaccgagatgatcgtggtttggttatggacaaagtatacgacgac
ttcaaatatgtaatggcaaatatgcgtgaaagcgatttgaatgtgcagaacctgaacagg
tacgttgcggcttcttttatatccagattcatgttgtttgagggaacttttcagcactat
cataacctggatgcggcaagggcaaaaaaatacctggagtttgcagtggaggcggggaat
tatgtgatggcgggaaaatggacatttggcagtgattataaagccttgttctcttcagat
aacctgtcaggtaaccccgaagttattttttatagaacatacgatgctggtttgggtatc
atgcattccattggctcctataataatggcacagaggtgccgggtgtagatgcgaacctg
gtgtttattaagtcgtttattgttaatgacggtaaggtatggcaaaattcggcagtgcct
aatgcaagttcatttgccattgctgatctggtaaaaaccagagacccaaggtttgaagct
tcatttattgacagggcgctaggaacttcagcaacgttattgtatagttttaaatatgca
tccagagaggccattacctatattggtaagagttatcccgctgcctggggcagtaatacc
aataccagtgatgcgcctgtaatgcgcttaggtgaggtggtattgaactggatagaagca
aaggctgaactggcaacatattacggtggtgctgcagttggccagggtgatatcgataaa
tcaattaatgctattcgcaaccgtccggtagatgctgttgctgttggaaaaggcgtggta
aaaacagcgccattaagtttggccgctttgcccactgatcctgcacgtgatggagatgta
ccagctttaatctgggaaattcgtagggaaagaagaatggagctgatgttggaacattcg
cgtttacttgatctgaagcgttggaaaaaattgagtaatatgaactttaccaatcctgat
tacttaatgggaccatgggtaaatgttcaggcagaggttcctgcttttctgactgcagca
aatgcgactgcaaaaacagtaaaagtaagaaagctggacggaactgttgttacctatgat
ggcaccaatgcggccgcaatggtgggtttctggatggtaaccggcgcagcgaatagaaat
gcttttaccgatcgtgcttatcttgccccggttgggcaaacgcagattgttcagtatcag
gaaaaaggttataaattaacgcagaccaagttgtggtaa
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