Pedobacter heparinus: Phep_4225
Help
Entry
Phep_4225 CDS
T00978
Name
(GenBank) PUA domain containing protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phe03009
]
Phep_4225
Enzymes [BR:
phe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Phep_4225
Ribosome biogenesis [BR:
phe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Phep_4225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUA_3
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
Methyltransf_15
PrmA
MTS
Methyltransf_25
TRM5-TYW2_MTfase
FtsJ
TRM
Motif
Other DBs
NCBI-ProteinID:
ACU06416
UniProt:
C6XXB0
LinkDB
All DBs
Position
5102153..5103337
Genome browser
AA seq
394 aa
AA seq
DB search
MIDVILKKGKEKAAMLRHPWIFSGAIDKIKGNPENGEVVTLRSAAKEFLAYAYYNDQSRV
ALRLLEWDENTTINKSWYREKLKAAIASRDHVLNENTNTCRLVFSEADFLPGLIVDKYAG
FLSLQILSAGMESIKATLIELLRELLNPTGIFDKSDAGARKHENLEATQGLLWGETPPEF
IEVKENGILYHINIADGQKSGFYCDQRDNRKILADYTRGKSVLDCFCYSGGFTLNSLKSG
AASVTSVDSSALAIETLQHNLELNGFKGSNQHSIQSDVNKQLRIFKDEGKTFDVLVLDPP
KYAPSRSALDRAARAYKDLNRLGMLLLKKGGILATFSCSGAVDMETFKQIIAWAALDAGR
EVQIIRQFCQPEDHPVSLSFPEGEYLKGLLLRIL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgtaatcctaaaaaaaggcaaagaaaaagccgctatgctccgtcacccctgg
atcttttctggtgcaattgataaaataaagggaaatcctgaaaatggagaagtggtaacc
ctaaggtcagcagcaaaagaatttctggcctatgcctattacaacgatcaatcccgggta
gcccttcgtttgctcgaatgggatgaaaataccacgataaacaagtcctggtaccgggaa
aaactcaaagccgccatcgcctcaagggaccatgtattaaacgaaaataccaatacctgc
agactggtattcagtgaagcagattttttacctggcctgatcgtagataaatatgccggc
tttctttccctgcaaatattaagtgcaggcatggaaagcataaaagcaacacttatcgag
ctcctcagggaattgctaaacccaacagggatattcgataaaagtgatgccggcgcacgt
aaacatgaaaacctcgaagctacacaaggtcttttatggggagaaacccctcctgaattt
attgaagtaaaagaaaacggcattctttaccacatcaacattgccgatggccagaagtca
ggcttctattgcgaccagcgcgacaaccggaaaatcctggctgattacaccaggggcaaa
tccgttctggattgtttctgctacagcggaggatttaccttaaacagcctgaaatccggt
gccgcatccgttaccagcgtagacagttctgcactggccattgaaaccctgcagcacaat
ctggaactgaacggttttaaaggatccaatcagcatagcatacaatctgatgtcaacaag
caactgcgcatttttaaagacgaaggaaaaacctttgatgtattggtgttagacccgcca
aaatacgcgccttcaagatccgcactggaccgggcagcaagggcttacaaagacctgaac
aggcttggcatgctcctgcttaaaaaagggggcatcctggctacattttcctgctccgga
gcagtagacatggaaacctttaaacagatcattgcatgggccgcattggatgcaggccgc
gaagtacagatcatcagacagttctgtcagcctgaagaccacccggtaagtctttctttc
cctgaaggagaatatctaaaaggattattgctaaggatactttaa
DBGET
integrated database retrieval system
