KEGG   Pedobacter heparinus: Phep_4238
Entry
Phep_4238         CDS       T00978                                 
Name
(GenBank) sigma-54 factor interaction domain-containing protein
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
phe  Pedobacter heparinus
Pathway
phe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:phe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Phep_4238
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:phe02022]
    Phep_4238
Two-component system [BR:phe02022]
 NtrC family
  HydH-HydG (metal tolerance)
   Phep_4238
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA AAA_2 HTH_30 AAA_22 Med11 AAA_3 bpMoxR PG_isomerase_N DUF815 Xre-like-HTH AAA_16 RsgA_GTPase TIP49 PDE8A_N HTH_17 AmiR_N nSTAND3
Other DBs
NCBI-ProteinID: ACU06429
UniProt: C6XXC3
LinkDB
Position
complement(5113643..5115046)
AA seq 467 aa
MRKILIVDDEINIGILLSKFLTRNSFSVSTATSGVSAMEYLAKEYYDLVLCDYRLEDTDG
KEMLIKIKEKYPRTGVIIITGYSDIKLAVELIKLGAYDYITKPLYPDEILNTINKSIETQ
MALNDAALPEVSEAPKQRAQKQQLYNQTDNFVAGQSNASRHLLKQIQLVAPTSYSVILTG
ESGTGKESVAKAIHLNSPRKDNPFVAMDCGSLTKELAGSEFFGHEKGSFTGALYTKIGHF
EMANGGTLFLDEVGNLSYDIQAALLRTVQERKIKRIGSTKEIDLDVRIIVATNENLANAI
QKGKFREDLYHRFNEFSIDLPPLSQRGRDILIFANTFLEVANQELGRSVQGFSQEVEDCF
LTYNWPGNVRELKNVIRRATLLTENQEIQLKALPLEISTYARANAIENTMSRNERPRDLK
NAALEAEYDAILKVLREVNFNKTKAAKILNIDRKTLYNKMRAINLEK
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagaaaaatattaattgttgatgatgaaataaatattgggatactattatctaaattt
ttaacgcgaaattcttttagtgtgtcgacggctacaagtggtgtttcggcgatggaatat
ctggctaaagagtattatgatctggttttatgcgattatcgtctggaagatacagatggc
aaggaaatgctgatcaaaataaaagagaaatatccaagaacaggagtgatcatcatcaca
ggctactctgatattaagcttgcggtagaactgatcaagctgggcgcttacgattacatt
accaagcccctttatccggacgagatcctgaatacgatcaataaatctattgaaacgcag
atggcgctgaatgatgcagccttgccagaggtttctgaagcgcctaaacagcgtgcccag
aaacaacagctgtacaaccagacggataactttgttgctggccagagcaatgcttcgagg
catttgctaaaacagatccaattggtggcaccaacttcttacagtgtaattttgactgga
gaaagtggtacaggtaaggaatctgtggcaaaggccatccatttgaacagtccgagaaaa
gacaatccatttgtggcgatggattgcggatccctgaccaaggagcttgccggaagcgag
tttttcggacatgaaaaaggttcttttacaggagccttatataccaagatcggccatttt
gaaatggcgaatggcggtacgctgtttctggatgaggttggaaacctttcttacgacata
caggcagctttactgaggactgtacaggaacgcaaaataaaacgtattggcagtactaaa
gaaattgacctggatgttcgcatcattgtggcgaccaacgagaaccttgccaatgccatt
caaaaagggaagttcagggaggatctgtaccatcgctttaatgaattctctatcgacctt
cctccgctgagccagcgtggaagggatatcctgatttttgccaatacctttctggaagtg
gccaatcaggaactgggcaggagtgtacagggtttttcgcaggaagttgaagattgtttt
ctgacctataactggccaggtaatgtaagggaactgaaaaatgtgatcagaagggctacc
ttgcttactgaaaatcaggaaattcagctaaaggcccttccacttgaaatttctacttat
gccagggcaaatgccatagaaaataccatgtcgcgcaatgaacggccaagggatttaaaa
aacgcagctttagaagcggagtacgatgccattttaaaggttttgagggaagtgaatttt
aataagaccaaggctgcaaaaatcctgaatatagaccgtaaaacactatacaataaaatg
agggccataaacctggaaaaatag

DBGET integrated database retrieval system