KEGG   Pseudomonas hefeiensis: PSH57_00205
Entry
PSH57_00205       CDS       T09985                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
phef  Pseudomonas hefeiensis
Pathway
phef03030  DNA replication
phef03410  Base excision repair
phef03420  Nucleotide excision repair
phef03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:phef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSH57_00205 (polA)
   03410 Base excision repair
    PSH57_00205 (polA)
   03420 Nucleotide excision repair
    PSH57_00205 (polA)
   03440 Homologous recombination
    PSH57_00205 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:phef03032]
    PSH57_00205 (polA)
   03400 DNA repair and recombination proteins [BR:phef03400]
    PSH57_00205 (polA)
Enzymes [BR:phef01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSH57_00205 (polA)
DNA replication proteins [BR:phef03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PSH57_00205 (polA)
DNA repair and recombination proteins [BR:phef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PSH57_00205 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSH57_00205 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 Obc1_cap WHD_BrxR GPAT_N
Other DBs
NCBI-ProteinID: WLH12833
UniProt: A0ABY9GB28
LinkDB
Position
45205..47973
AA seq 922 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDELYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLEIVATLPIRGAKTLAAKLEEHKEM
ALLSYELATIKTDVPLDVGLDDLKMGQPDHEKLAELYTLLEFKSWFEENQRDAKRAGQEI
VEAADEQPGAVEAKYEVILDQARFDAWLAKLEQAPLFAFVTETNGSDAQHSQLVGLSFAV
APFEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLENPNKLKVGQHAKFETNILANCAMGG
DQNNGILVQGVAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAATPSLGKVLNDIEMPLMPVLARIERQGALV
DAHLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVELDAVTHDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLAYMERTRAQAAEQGYVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLTASGLDAKVILQVHDELVLEVREDLVDQVREEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgagccaagctcccctcgtcctggtggacggttcttcttatctttatcgcgcctttcac
gcgctgccaccgttgaccacctccaaaggcctgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagtccgttcgccgtggtgttcgac
gccaagggtgggacgtttcgcgatgagctgtacgccgaatacaaggccaaccgcccgagc
atgcccgacgatatgcgcgtgcagatcgagccactgcatgccagcgtcaaggccctgggc
ttcccgctgctgtgcgtggacaacgtcgaagccgatgatgtgatcggcaccctggcccgc
agcagcgccgcagccgaccgtccggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgatgggcacattaccttggtcaataccatgaccggtagcgccctggacgtggct
ggcgtgaaggagaagtttggggtcgctccggagcagatcatcgattacctggcgttgatg
ggcgattcttccgacaacatccccggtgttccgggtatcgggccgaagaccgcctccggc
ttgctggtgggcgtcaatggcggcctgaccgagctgtatgcgcaactggagatcgtcgcc
accttgccgatccgtggcgccaagaccctggccgccaagctcgaagaacacaaggaaatg
gccctcctctcctacgagctggcgaccatcaagaccgacgtgccgctggatgtcggtctc
gacgacctgaaaatgggccagccggatcacgagaaactcgccgagctgtataccctgctg
gagttcaagagctggttcgaagaaaaccagcgcgatgccaagcgtgccggtcaggagatc
gtcgaagccgccgacgaacagcccggcgccgttgaagcgaagtacgaggtcattctcgat
caggcacgtttcgacgcctggctggccaagcttgaacaggcgccgctgtttgctttcgtc
accgaaaccaacggtagcgacgctcagcattcacaactcgtagggttgtcgtttgccgtc
gcgccttttgaggcggcctacattcccttgacccattcctacatgggcgtaccggagcaa
ctggatcgcgacacggtgctcaaggctctcaagccgctgctggagaacccgaacaagctc
aaggtcggccagcatgccaagttcgaaaccaacatcctggccaactgcgccatgggtggc
gatcagaacaacggcatcctggtccagggcgtcgccttcgacaccatgcttgaatcctac
gtgctggactccaccgcgacccgccacgacatggacagcctggcgctcaagtacctgggc
caaagcaagaccgatttccaggacatcgcaggcaaaggcgtcaagcaactgaccttcgac
cagatctccctggaactggccggcccttacgccgccgaagacgcggacgtgacgttccgt
ctgcaccaggccttgcaggaaaaactggcggccacgccaagcctgggcaaggtgctcaac
gacatcgaaatgccactgatgccggtcctggcacgcattgagcgccagggtgcgctggtc
gatgcccatctgctgggggtgcagagcgtcgagttgggcgagaagctggtggccctcgaa
cgtgaggcatttgccatcgccggggaggaattcaacctgggctcacccaagcaactgggg
gtgatcctctacgaaaaactcggcttgccggtgctcagcaaaaccgccaagggccaggca
tctaccgccgaagcggtactggccgaactggccgagcaggattacccgttgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgaccgcctgccggag
cagatcaatagccgtacagggcgcgtccataccaattatcagcaagccgttgccgctacc
gggcggctgtcgtccatcgacccgaacctgcagaacattcctatccgcaccgccgaaggc
cgccggatccgtcaggcattcgttgcgccgaaaggctacaagctgttggcggcggactac
tctcagattgaattgcggatcatggcgcacctggccaaggatgaaggcctgctccacgcg
tttcgcaatgacctggatgtgcaccgggccaccgccgccgaagtgttcggtgttgaactg
gatgccgtcacccatgaccagcgccgcagcgccaaggcgatcaacttcggtctgatctac
ggcatgagtgctttcggtctggccaagcagatcggtgtggatcgcaagcagtcccaggct
tatatcgaccgctactttgcccgctacccgggtgtactggcctacatggagcgcactcgt
gcccaggcggctgagcaggggtacgtcgaaaccattttcggtcgccggttatacctgccg
gatatcaatgcgaaaaacccggctttgcgcaaaggggcggaacgcacggccatcaacgcg
ccgatgcaaggcacagcggcagatatcatcaagaaagccatggtggcggtggatcgctgg
ctgactgcgtcggggctggatgccaaggtcatcctgcaggtccacgacgaattggtgctg
gaggtgcgcgaagacctggtcgaccaggtgcgcgaggaaattcgccagcacatgagcgcc
gccgccacgctggatgtgccgcttctggtggaagtgggcgtgggcaacaactgggacgag
gcgcactga

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