Pseudomonas hefeiensis: PSH57_00205
Help
Entry
PSH57_00205 CDS
T09985
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef03030
DNA replication
phef03410
Base excision repair
phef03420
Nucleotide excision repair
phef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSH57_00205 (polA)
03410 Base excision repair
PSH57_00205 (polA)
03420 Nucleotide excision repair
PSH57_00205 (polA)
03440 Homologous recombination
PSH57_00205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phef03032
]
PSH57_00205 (polA)
03400 DNA repair and recombination proteins [BR:
phef03400
]
PSH57_00205 (polA)
Enzymes [BR:
phef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSH57_00205 (polA)
DNA replication proteins [BR:
phef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSH57_00205 (polA)
DNA repair and recombination proteins [BR:
phef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSH57_00205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSH57_00205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
WHD_BrxR
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
WLH12833
UniProt:
A0ABY9GB28
LinkDB
All DBs
Position
45205..47973
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDELYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLEIVATLPIRGAKTLAAKLEEHKEM
ALLSYELATIKTDVPLDVGLDDLKMGQPDHEKLAELYTLLEFKSWFEENQRDAKRAGQEI
VEAADEQPGAVEAKYEVILDQARFDAWLAKLEQAPLFAFVTETNGSDAQHSQLVGLSFAV
APFEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLENPNKLKVGQHAKFETNILANCAMGG
DQNNGILVQGVAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAATPSLGKVLNDIEMPLMPVLARIERQGALV
DAHLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVELDAVTHDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLAYMERTRAQAAEQGYVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLTASGLDAKVILQVHDELVLEVREDLVDQVREEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcgtcctggtggacggttcttcttatctttatcgcgcctttcac
gcgctgccaccgttgaccacctccaaaggcctgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagtccgttcgccgtggtgttcgac
gccaagggtgggacgtttcgcgatgagctgtacgccgaatacaaggccaaccgcccgagc
atgcccgacgatatgcgcgtgcagatcgagccactgcatgccagcgtcaaggccctgggc
ttcccgctgctgtgcgtggacaacgtcgaagccgatgatgtgatcggcaccctggcccgc
agcagcgccgcagccgaccgtccggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgatgggcacattaccttggtcaataccatgaccggtagcgccctggacgtggct
ggcgtgaaggagaagtttggggtcgctccggagcagatcatcgattacctggcgttgatg
ggcgattcttccgacaacatccccggtgttccgggtatcgggccgaagaccgcctccggc
ttgctggtgggcgtcaatggcggcctgaccgagctgtatgcgcaactggagatcgtcgcc
accttgccgatccgtggcgccaagaccctggccgccaagctcgaagaacacaaggaaatg
gccctcctctcctacgagctggcgaccatcaagaccgacgtgccgctggatgtcggtctc
gacgacctgaaaatgggccagccggatcacgagaaactcgccgagctgtataccctgctg
gagttcaagagctggttcgaagaaaaccagcgcgatgccaagcgtgccggtcaggagatc
gtcgaagccgccgacgaacagcccggcgccgttgaagcgaagtacgaggtcattctcgat
caggcacgtttcgacgcctggctggccaagcttgaacaggcgccgctgtttgctttcgtc
accgaaaccaacggtagcgacgctcagcattcacaactcgtagggttgtcgtttgccgtc
gcgccttttgaggcggcctacattcccttgacccattcctacatgggcgtaccggagcaa
ctggatcgcgacacggtgctcaaggctctcaagccgctgctggagaacccgaacaagctc
aaggtcggccagcatgccaagttcgaaaccaacatcctggccaactgcgccatgggtggc
gatcagaacaacggcatcctggtccagggcgtcgccttcgacaccatgcttgaatcctac
gtgctggactccaccgcgacccgccacgacatggacagcctggcgctcaagtacctgggc
caaagcaagaccgatttccaggacatcgcaggcaaaggcgtcaagcaactgaccttcgac
cagatctccctggaactggccggcccttacgccgccgaagacgcggacgtgacgttccgt
ctgcaccaggccttgcaggaaaaactggcggccacgccaagcctgggcaaggtgctcaac
gacatcgaaatgccactgatgccggtcctggcacgcattgagcgccagggtgcgctggtc
gatgcccatctgctgggggtgcagagcgtcgagttgggcgagaagctggtggccctcgaa
cgtgaggcatttgccatcgccggggaggaattcaacctgggctcacccaagcaactgggg
gtgatcctctacgaaaaactcggcttgccggtgctcagcaaaaccgccaagggccaggca
tctaccgccgaagcggtactggccgaactggccgagcaggattacccgttgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgaccgcctgccggag
cagatcaatagccgtacagggcgcgtccataccaattatcagcaagccgttgccgctacc
gggcggctgtcgtccatcgacccgaacctgcagaacattcctatccgcaccgccgaaggc
cgccggatccgtcaggcattcgttgcgccgaaaggctacaagctgttggcggcggactac
tctcagattgaattgcggatcatggcgcacctggccaaggatgaaggcctgctccacgcg
tttcgcaatgacctggatgtgcaccgggccaccgccgccgaagtgttcggtgttgaactg
gatgccgtcacccatgaccagcgccgcagcgccaaggcgatcaacttcggtctgatctac
ggcatgagtgctttcggtctggccaagcagatcggtgtggatcgcaagcagtcccaggct
tatatcgaccgctactttgcccgctacccgggtgtactggcctacatggagcgcactcgt
gcccaggcggctgagcaggggtacgtcgaaaccattttcggtcgccggttatacctgccg
gatatcaatgcgaaaaacccggctttgcgcaaaggggcggaacgcacggccatcaacgcg
ccgatgcaaggcacagcggcagatatcatcaagaaagccatggtggcggtggatcgctgg
ctgactgcgtcggggctggatgccaaggtcatcctgcaggtccacgacgaattggtgctg
gaggtgcgcgaagacctggtcgaccaggtgcgcgaggaaattcgccagcacatgagcgcc
gccgccacgctggatgtgccgcttctggtggaagtgggcgtgggcaacaactgggacgag
gcgcactga
DBGET
integrated database retrieval system