Pseudomonas hefeiensis: PSH57_00255
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Entry
PSH57_00255 CDS
T09985
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
phef
Pseudomonas hefeiensis
Pathway
phef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSH57_00255 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
phef02022
]
PSH57_00255 (algB)
Two-component system [BR:
phef02022
]
NtrC family
KinB-AlgB (alginate production)
PSH57_00255 (algB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
VpsR
AAA_22
cREC_REC
AAA_2
AAA_19
HTH_23
MCM
AAA_16
HTH_29
Xre-like-HTH
nSTAND3
HTH_50
DUF1858
IstB_IS21
DUF815
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WLH12841
LinkDB
All DBs
Position
complement(58374..59720)
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AA seq
448 aa
AA seq
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MESATEHQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQADTLLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPNDGLDSHSPAMKVVLETARQVASTDANILILGESGTG
KGELARAIHGWSKRAKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERVEDILTLADRFLARFVKEYARPARGFSDEAREALLGYRW
PGNIRELRNVVERASIICAQEKVEISHLGMAEQPVNNAPRIGAALSLDELEKAHIGAVLA
TAETLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgccactgagcatcaaggccgcattctgctggtagacgatgagtccgccatc
ctgcgtaccttccgttactgcctggaagacgaaggctacagcgtcgccaccgccaacagc
gctgcccaggccgacaccctgctgcagcggcaggtgtttgacctgtgctttctggacctg
cgcctgggagaagacaacggcctcgatgtgctggcgcaaatgcgcatccaggctccctgg
atgcgggtggtgatcgtcaccgctcactcggcggtcgacaccgccgttgatgcgatccag
gccggcgccgccgattacctggtcaagccttgcagccccgatcaactgcgcctggcgact
gccaaacagctggaggtacgccagttgtcggcgcgactggaagctctggaaggggaagtg
cgcaaacccaatgacggcctcgattcccatagcccagcgatgaaagtcgtccttgaaacc
gctcgccaggtcgccagcactgacgccaacattctgatccttggcgagtccggcaccggt
aagggcgaactggcccgagccatccatggctggagcaagcgcgcgaagaagtcctgcgtc
actatcaattgcccgtcgctgaccgctgaattgatggaaagcgaactgttcggccacagc
cgcggcgcatttaccggcgccagtgaaagcacgctgggacgggtcaatcaggccgacggc
ggtacgctttttctcgatgaaatcggcgattttcccctgacattgcagcccaagttgctg
cgctttatccaggacaaggaatacgagcgggtcggcgacccggtgacccgtcgtgccgat
gtgcggattctcgcggcgactaacctcaaccttgaagacatggtgcgcgacgggcgcttt
cgcgaagacctgctgtatcgcctgaatgtcattaccctgcatctgccgccactacgcgag
cgagtcgaagacatcctgacccttgccgaccgtttcctggcgcgcttcgtcaaggagtac
gcccgcccggcacgaggcttcagcgacgaggcgcgcgaagcgctgctaggttatcgctgg
cctggcaacatccgggagctgcgcaacgtggtcgagcgcgccagcatcatctgcgcgcag
gaaaaagttgaaatcagccacttgggcatggctgagcaacctgtcaacaatgcaccgcga
atcggtgccgcgctgagtctcgacgaactggaaaaggcgcatattggcgcggtgctggcc
acggccgagacccttgaccaggccgccaagaccctgggtatcgatgcgtccacactgtat
cgcaaacgcaagcaatacaacctgtga
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