Pseudomonas hefeiensis: PSH57_00675
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Entry
PSH57_00675 CDS
T09985
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
phef
Pseudomonas hefeiensis
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phef03000
]
PSH57_00675
Transcription factors [BR:
phef03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSH57_00675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_20
HTH_5
MarR_2
HTH_30
HTH_IclR
HTH_24
I-HmuI_NUMOD-like
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WLH12920
LinkDB
All DBs
Position
complement(138941..139858)
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AA seq
305 aa
AA seq
DB search
MSHDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGVSLFIKDGRGL
KLTDAGMRLRDASAEAFERLRTVCAQLTQSTADAPFVLGCSGSLLARWFIPRLGRLNADL
PDLRLHLSAGEGDLDPRRPGLDALLVFAEPPWPADMQVYELVSERIGPVMSPHYAGFARL
QNAPPSAILGEALLHTTSRPQAWPTWAQQNALDPKALKFGQGFEHLYYLLEAAVAGLGVA
IAPEPLVAEDVRAGRLVAPWGFDETPARLALWLPKRAADGRARQLAQWLRHELNPPTQSP
RLHSK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgaccttccccccctcaacgccttgcgcgccttcgaagccactgcccgcctg
aacagcgtgagccaggcggccgaacagctacatgtcacccatggtgcggttagccgacag
ttgaaggtgctggaagaacacttgggcgtcagcctgttcatcaaggatggacgcggcctt
aaactcacagatgcaggtatgcgtctgcgcgacgccagcgccgaggcgttcgagcggtta
cgcaccgtctgtgcgcagctgacgcaaagcacagcggatgcaccgttcgtactgggctgc
tcgggaagtctgctggcgcgctggttcattcctcgcctgggccggctcaatgccgatctg
ccggatttgcgcttgcatctttccgctggcgaaggcgaccttgaccccaggcgaccaggg
cttgacgcgttgctggtattcgcagaaccgccgtggccggcagacatgcaggtctatgaa
ctggtcagtgagcggatcggcccggtcatgagccctcattacgccggtttcgcccggctg
caaaacgccccgccgagtgcaattctgggcgaggcgctgctgcataccacctctcgtccc
caggcgtggcccacctgggcacagcaaaacgcccttgaccccaaggcgttgaagttcggg
cagggtttcgagcatttgtattacttgctggaggccgccgtggcggggctaggcgtggcc
atcgcccccgagccgttggtcgccgaggatgtgcgcgccggtcgcctggtcgcgccgtgg
ggctttgacgaaaccccggcgcgactggcgctgtggctacccaagcgcgccgcggacggg
cgcgctcggcaattggcgcaatggctcagacatgagctgaacccaccgactcagtcgccg
cgcttgcacagcaaataa
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