KEGG   Pseudomonas hefeiensis: PSH57_00855
Entry
PSH57_00855       CDS       T09985                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
phef  Pseudomonas hefeiensis
Brite
KEGG Orthology (KO) [BR:phef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phef03000]
    PSH57_00855
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phef02044]
    PSH57_00855
Transcription factors [BR:phef03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PSH57_00855
Secretion system [BR:phef02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PSH57_00855
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA_7 HTH_30 AAA GAF
Other DBs
NCBI-ProteinID: WLH12950
LinkDB
Position
180733..182250
AA seq 505 aa
MFNQIAQPLAYAEALLAQFTHLSRAVDGPALLGDFILGVASLSGCELTQLYVLDATHTRL
EVHTECLEGQLQVRDRTSVPSNYRGEQLLQFALCQNRVVCLGALSDSLYETSFLPVRAAP
WQSLLCVPLVNPQETVEGLLLCASGQHIDLQGFAESLGHLGVFALGRIHQLKLLPSPSGN
PRPVATSVPSANGSSLIGKSAAMRQTWSLISKVLDSPYTVLLCGETGTGKEVVARAIHDR
GVRCSKAFIVQNCAAVPEHLLESELFGYRKGAFTGADRDRPGLFDSANGGTLLLDEIGDM
PLSLQAKLLRVLQEGEIRPLGSNDTHTVDVRIIAATHRNLKQLMEEGKFREDLYYRLAQF
PIQLPALRHRDGDILELARHFADKACVFLRREPVRWSGAALRHLAAYGYPGNVRELKAVV
ERAVLLCEGGEILVEHFALHIETAAEQGHSNLRERMRQVERKLLIDCLRKNAGNQTLSAR
ELGLPLRTLLYRLGRLKICRKDFDD
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgttcaatcagattgcgcaaccgctggcttacgctgaagccctgctggcgcaatttacc
cacttgtcgcgggcggtggatggccctgcattgctgggggatttcatcctgggcgtggcg
agcctcagtggctgtgaactgacgcagctatacgtgctcgatgccacccatactcgtctg
gaagtgcacactgaatgcctggaaggccaattgcaggttcgtgatcggaccagtgtccct
tccaattaccgcggtgaacaactgttgcaattcgccctgtgtcagaaccgcgtggtgtgc
cttggtgcgttgagcgacagcctgtacgaaaccagttttctgccggtgcgggcagcgccg
tggcagtcgctgctctgcgttcccctcgtcaacccgcaggaaaccgttgaaggtctgttg
ctgtgtgccagtggtcaacacatcgacttgcaggggttcgcggagtcactggggcatctt
ggtgtgttcgcgctcggccggatacatcagttgaagctccttcccagcccatccggcaac
cctcgaccagtcgccacaagcgtgccgagcgccaacggctccagtctgatcggcaagagc
gcggcgatgcgccaaacctggtcattgatcagcaaggtcctggacagcccttacaccgtc
ctgctgtgtggtgagacaggcactggcaaggaggtggtggctcgggcgatccacgatcgg
ggtgttcgctgttccaaggcgtttatcgtgcagaactgcgcggcggttcccgaacatttg
ctggaaagtgagctgttcggctatcgcaagggtgccttcaccggtgcagatcgggaccgc
ccggggctgttcgattcggccaacggaggcactctgctgctcgatgaaattggcgacatg
ccattgtctcttcaggccaagctgttgcgggtgttgcaggaaggtgaaatccgtccgctg
gggtccaacgacacccacacagtcgatgtgcgcatcatcgccgccactcatcgcaacctg
aaacagttgatggaggagggcaagttccgcgaggacctgtactaccgcctcgctcagttt
ccgatccagttgccggcgttgcgtcatcgcgacggcgacatccttgagctggcgcggcat
tttgccgacaaggcatgcgtgttcctgcgacgagaacccgtgcgctggtccggcgctgcg
ctgcgccatctggctgcctacggttatcccggcaatgtacgtgagttaaaggctgtggtg
gaaagagccgtgttgttgtgcgagggcggggaaatattggtcgagcattttgcgctgcac
atcgaaacggcggcagaacaaggtcattcaaatctgcgcgaacggatgaggcaggtcgaa
cgtaagttgctgatcgattgccttcgaaaaaacgccggtaaccagacgctttccgcccgt
gagctcggcttgccgctgcgcacactgctttatcgcctcgggcgtttgaagatatgtcgg
aaagatttcgatgattga

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