Pseudomonas hefeiensis: PSH57_00875
Help
Entry
PSH57_00875 CDS
T09985
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
phef
Pseudomonas hefeiensis
Pathway
phef02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH57_00875 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phef02044
]
PSH57_00875 (tssK)
Secretion system [BR:
phef02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH57_00875 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WLH12954
LinkDB
All DBs
Position
184179..185510
Genome browser
AA seq
443 aa
AA seq
DB search
MNHDKVIWQEGMLLRPQHLQHNDRYFDHQLKVRTRLLASYAWGFLALEIDSQFLGMGQLV
VSQASGVLPDGSLFELGGNADPLVLEVPSNTRNTSIYLALPLVTGNHIEARRPEQSDVLA
RFTTYESRVTDSNAGEASASLVSCGRADLRLLLGEQQSDPAFVKLKLCEVLDTTSDGVIK
LNLDFVPTFIQARSSSYLLSCLKEVIGMLAHRGDSLAERIRTHGKAGGAQVGDFMMLQLI
NRTELLLRHYLELDQAHPETLYRTLLALLGDLATFSSDSKRPPLNNRYQHNNQGACFRSL
MQAIRQMLSMVLEQHAIELQLQVRQYGILVAPIPDLSLLDSASFVLAASAHCDGEALRHR
LPSHLKVGPVERIRQLVNLHLPGIKIRPLPVAPRQIAFHANKTYFILEPNSEDLAQLKRS
AGFAFHVSGDFAELELNFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgataaagtcatctggcaggaaggcatgctgctgcgtccgcaacatttgcag
cataacgaccgctacttcgatcaccagttgaaggtccgcacccgtttgttggccagttat
gcctggggttttctggcactggaaatagattctcagtttcttggcatgggccagttggtg
gtcagtcaggcttcgggggtcctgccggacggcagcctgttcgagttgggtggcaacgcc
gatccattggttttggaggtgccatccaatacccgcaacacgtcgatctacctggccctg
ccactggtgacgggcaatcacatcgaggctcgccgcccggagcagtctgacgtgctggcc
cgctttacgacttatgagtcgcgggtcaccgactcaaacgccggagaggctagcgcgagc
ctggtcagttgtggccgagcggacttgcgcctgctgttgggcgagcagcaaagcgatccg
gcgtttgtgaagctcaagctctgtgaagtactcgacacgacgtccgatggagtgatcaaa
ctcaacctggacttcgtgccaacttttatccaggcgcgatcatccagttatctactgtca
tgcctcaaggaagtcattggcatgcttgcccaccggggcgacagccttgccgagcggatt
cgtacccacggcaaggcgggtggcgcacaagttggcgatttcatgatgctgcaactgatc
aaccgtaccgaactgttgctgcgtcattatctggaactggaccaggcgcatcccgaaacg
ctataccgcacgctattggccttgctgggtgacctggcgacattctccagtgatagcaag
cgcccgccgctcaacaaccgctaccagcacaacaaccaaggcgcctgctttcgaagcctg
atgcaagcgatccgccagatgctgtcgatggtgcttgagcagcatgctatcgagctgcaa
ttgcaggtgcgtcagtacggaatcctcgtcgcgccgataccggatctctcgttgctggac
tcggcttcgttcgtactggcggcaagtgcccactgcgatggtgaagcgttgcggcatcgc
ttgccttcgcacctcaaggtcggtccggtggaacgcattcgccaattggtaaacctgcat
ctgcctggcatcaagatccggcctttgcccgtggcgccgcggcagattgcgttccatgcc
aacaaaacctatttcatcctcgagcccaattccgaagacctggctcaactgaagcgctcc
gcaggtttcgcctttcatgtttccggggacttcgccgagcttgaattgaacttctgggcc
atcaggaactga
DBGET
integrated database retrieval system
