Pseudomonas hefeiensis: PSH57_00885
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Entry
PSH57_00885 CDS
T09985
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
phef
Pseudomonas hefeiensis
Pathway
phef02025
Biofilm formation - Pseudomonas aeruginosa
phef03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSH57_00885 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSH57_00885 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phef02044
]
PSH57_00885 (tssM)
Secretion system [BR:
phef02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSH57_00885 (tssM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
WLH12956
LinkDB
All DBs
Position
186393..189872
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AA seq
1159 aa
AA seq
DB search
MKLFFRKAGACVRRTWVWTLLLVFCAGLLVWLVGPLLAVNDYKFWSTPTARLLSISILLL
GWGLGMVFVNGRAGATMNTKEVASERDSIRRQTRIDEERRELRSRFAQALRTLKASSLYP
GRGGPWRNELPWYLLMGSPASGKTSLLDCSGLEFPINRHEQKPMADTSAIRSCDWYFAEG
AVLIDTPGRYLSQEDSDVDGSAWAALLELLRKRRRGRPLNGLLMVVPSDVLLQAREDEVA
TLACQIRGRLHEVRSRLHINVPIYLVLSKADSVPGFNEFFDSLTREESDQVLGASFNQDQ
RGNDMAVLQAEFEALLHRLNGQVLMRMHQERDTRRRSQILDFPHQLGLIGTRLRLLVDLA
FTTDNCRLRGFYLTCACSPAFSMDSAVPVNASFRSAGVASGGRSRFIRHLLSRVIFPEAD
LAGLDQRERRRIHWGQRALYLGALAVLGVFGLLWANGFSANHERLESLRTLAQRWDQQRS
ALVAGDDSMLKSLDIRYEATRVFPHGGEVPLYERVGLYQGQASNPTVVGAYERELQAHLL
PRVAQMLEAHIRGNLNNREHLLNSLRAYLMLNLQERRDTAWLKDRLASDWSLRYAGNTAA
QNGLNAHFQRLLDQPFTYLLDEPLVASAREALRRESLASVVYRMLREKASHLPQYRLSQH
MGPQGALLVGTDHVIPGFYTRQGYERYFSVQGTTLVIELLRDNWVLGEGASLSGMDMRRL
MIELEQLYFSDYADQWSEAVGQVALHSISDMGEGAEQLAGLTSAHSPILRMLVQVREHTQ
ILSVAERIDDEQQTVGNGGNTIAHIVAITEKTAGALADNLPDTAQKSLRRRFEPLHRLLD
LDESPLHDLTQVLQALDEVQLQLANLVRAGAPEQAAFELAKRRMGGQRDALSNLRSASAR
LPRPISEWFQVLAEDSWRLVLNDSYRYLNLRYQSELYSFYGKAINKRYPFSAHSASDVAI
NDFREFFKDQGVVDRFFESYMRPFVSGHPGLYRLRSIDGQSLPVSRAYLDQMAAANTIRR
SFFAENPAEPQVQFKLEPYTLDPAVSRSEFRFGDKTLEYRHGPILPVTFTWPSDAQDGRT
ALVLDKMVGRGVGIEKNMGPWSLFRLFDLMQTEYLTGRDVRVLKADLGGLRANYLLTSQR
TPNPFDMSVLRTFRMPVQL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtttttccgaaaagccggtgcttgtgtgcgtcggacctgggtctggacgttg
ctgctggtattttgtgcggggttgctggtgtggctcgtcgggccgctactggcggtcaat
gactacaagttctggtcgaccccgacggcacggctgctgtcgatcagtatcttgctgctg
ggttgggggctgggcatggttttcgtcaatgggcgagccggcgcgaccatgaacaccaag
gaagtcgccagcgagcgggattctattcggcgtcagaccaggattgacgaggagcgacgt
gaactgcgctcgcgcttcgcgcaggctttaagaacgctgaaagcctcaagtctctatccc
ggtcgtggcggaccctggcgaaacgaactgccgtggtatttgctgatggggtcgcccgct
agcggcaagactagcctgctggactgttcaggtctggagttccccatcaacaggcatgag
caaaagccgatggctgacacctcggctatccggagttgcgactggtactttgccgagggt
gccgtgctgatagacacgcccgggcgctacttgagccaggaggatagtgatgtcgacggc
agcgcttgggccgctttgctggagttgctacgcaagcgtcgtcgcggtcgccccttgaat
ggcttgctgatggttgtgccgagcgacgtcttgctgcaggcgcgtgaggatgaggtcgcc
accctggcttgtcagattcgtggccgcttgcacgaggtgcgaagtcggctgcacattaat
gtgccgatttacctggtccttagcaaagcggacagcgtgcctggcttcaacgagttcttt
gattcgctgactcgcgaggaaagtgaccaggtgctgggtgcgagtttcaaccaggaccag
cgcggtaacgatatggcggtattgcaagccgaattcgaggcgttgctgcatcgccttaac
ggtcaggtgctcatgcgcatgcatcaggagcgcgacacccggcgccgtagtcagatcctt
gatttccctcatcaactgggactgatcgggacccgcttgcgtctgctggtcgacttggcc
ttcaccaccgataactgccggttacgcgggttctacctgacctgcgcgtgctcgccagcc
tttagcatggattcggcagtcccagtcaacgccagctttcgcagtgcgggtgtcgcgtct
ggagggcgatcgcgatttatccgtcatttgcttagcagggtcatttttccggaggccgac
ctggccggtctcgatcagcgcgaacgcagacgtatccactggggccagcgtgctttgtac
ctgggagcgctggcggtccttggtgtgttcgggttgttgtgggcaaatgggttttcggcc
aaccatgagcgtctggagagcttgcgtacgttggcgcagcgttgggatcaacagcgctcg
gccctggtggccggtgatgactcgatgctcaagtctcttgatatccgttacgaagccact
cgggttttcccgcatggcggggaggtaccgttgtatgagcgtgtcggtctgtatcagggc
caagcgagtaacccaacggtagtcggcgcttacgagcgtgaactacaggcacacctgctt
cctcgggtcgcgcagatgcttgaggcgcatatccgtggcaatttgaataatcgtgaacat
ttgctcaatagcttgcgcgcgtacttgatgctcaacctgcaggagcgtcgcgacactgct
tggctcaaggatcggcttgccagcgattggtcgctgcgttacgccggtaatacggcagcg
cagaatggcttgaatgctcacttccagcgtctgcttgaccagccgttcacctatctgctt
gatgagccgctggtggccagtgcccgggaggccttgcgccgagaatccctggcgagcgtc
gtttaccgaatgctccgagagaaggccagtcacctgccgcaataccgtctcagtcaacat
atggggccgcagggcgcgttgctggtaggcaccgatcatgtgatccccggtttctacaca
cgccaggggtacgagcgatacttttcagttcagggcacgacgctggttatagaactgctg
cgagacaactgggtattgggtgagggcgctagccttagcggcatggacatgcggcgactg
atgatcgaactggagcaactgtattttagcgactatgccgaccagtggagcgaagcggtc
ggccaggttgccctgcattcgatcagcgatatgggggagggcgccgagcaactggcggga
ttgacgtctgcccactcgccaatcctgcgaatgctggtgcaagtgcgtgagcacacgcaa
atcctgagcgttgcagagcgtatcgatgatgagcaacaaacggtcgggaacggtggcaat
accattgcacatatcgttgccattaccgagaaaacggccggtgccttggccgacaatttg
ccggacaccgcgcagaaatccttgcgacggcgtttcgagccactgcaccgtctgttggat
cttgatgaaagtccgctgcacgacctgacccaggtcttgcaggccctggacgaggtgcaa
ttacaactggcgaaccttgtccgtgccggtgcgccggagcaggccgcgttcgaattggcc
aagagacgcatgggcggccagcgtgatgcactgagtaacctgcgcagcgcctcggctcgt
ttgccacgtccgatcagcgagtggtttcaggttctggccgaagacagctggcgcttggtg
ctcaatgattcctaccgttacctgaacctgcgctaccagagcgagctttacagcttttac
ggcaaggcaatcaataagcgatatccgttcagcgctcacagtgccagtgacgtggcgatc
aacgacttccgggagttcttcaaggatcagggcgttgtcgatcgattcttcgagagctac
atgcgaccctttgtcagcggtcatccgggcctctaccgcctgcgcagcatcgacggccaa
agtttgccggtgtccagggcttatcttgaccagatggctgcggcgaacaccatccgccgg
agtttttttgccgaaaacccggccgagccgcaggtgcagttcaagcttgaaccgtacacg
ctggatccggcggtgagccgttccgaattccgttttggcgacaagacgctggagtatcgt
cacgggccgattttgcctgtgaccttcacctggccaagcgatgctcaagatggtcgaacc
gccctggtgctggacaaaatggtcgggcgaggggtgggtatcgagaagaatatggggcca
tggtcgctttttcgtttgttcgacctgatgcagaccgaatacctgaccggacgcgacgtg
cgcgtactcaaggcagacctgggcggcttgcgagccaattatctgttaacgagccaacgc
acacccaacccgttcgacatgagcgtgctacgcacttttcgaatgccggtgcagctttga
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