Pseudomonas hefeiensis: PSH57_04425
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Entry
PSH57_04425 CDS
T09985
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
phef
Pseudomonas hefeiensis
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phef03019
]
PSH57_04425 (rapZ)
Messenger RNA biogenesis [BR:
phef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSH57_04425 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_28
AAA_29
CoaE
T2SSE
AAA_16
FtsK_SpoIIIE
RsgA_GTPase
SKI
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WLH13609
LinkDB
All DBs
Position
complement(1040102..1040959)
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AA seq
285 aa
AA seq
DB search
MRMIIVSGRSGSGKSTALNVLEDSGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLAEVRNRHIQCDVLYLDADEETLLKRFSETRRRHPLSNASRSLAEA
IHDESQLLGPIADLADLKVNTTHLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREQSGLDQPVVDYLAAQPDVEEMYQDISSYLLKWLPRFAA
SNRSYVTIAIGCTGGHHRSVYLTERLGQLLQQSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgatcattgtcagcggacgctccggctccggtaaaagcacggcgcttaacgtg
cttgaggacagcggctactattgcatcgacaatctgcccgccggcctgctgccggagttg
gccgagcgcgccctgatccataccgagctggctcaaccgctggtggcagtgtccatcgat
gcacgtaatctgccgagccacctgtcgcgcttccccgaactgctcgcggaagtacgcaac
cggcacatccagtgcgatgtgctgtacctggatgccgatgaggagacgctactcaagcgc
ttttccgaaacccgccggcgtcatcccctgagtaacgcgagccgctccctggccgaagcc
atccatgacgaaagccaactgctggggccgatcgccgacctggcggacctgaaggtcaac
accacccacctgaatctgtatcaactgcgcgacaccatcaagttacgcctgctgaaccag
ccggaaccggggacggcgtttctggtggagtcgttcggtttcaagcgcggaatgccagta
gacgccgacctggtgtttgacgtgcgctgtttgcccaacccctactggaaaccggaattg
cgcgagcaatcagggctcgaccagccggtggtcgactacctggccgcccagccggatgtc
gaggaaatgtaccaggatatctccagctacctgctcaaatggctgccgcgctttgccgcg
agcaaccgctcctacgtcacgatagccatcggctgtaccggtggccatcaccgctccgtc
tacctgaccgaacgtttgggtcagctcctgcaacagtccctgaagaacgtccaggttcgc
caccgcgacctcagctaa
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