KEGG   Pseudomonas hefeiensis: PSH57_05405
Entry
PSH57_05405       CDS       T09985                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
phef  Pseudomonas hefeiensis
Pathway
phef03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:phef00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PSH57_05405 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phef03019]
    PSH57_05405 (rnc)
   03009 Ribosome biogenesis [BR:phef03009]
    PSH57_05405 (rnc)
   03036 Chromosome and associated proteins [BR:phef03036]
    PSH57_05405 (rnc)
Enzymes [BR:phef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PSH57_05405 (rnc)
Messenger RNA biogenesis [BR:phef03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PSH57_05405 (rnc)
Ribosome biogenesis [BR:phef03009]
 Eukaryotic type
  90S particles
   RNase
    PSH57_05405 (rnc)
 Prokaryotic type
  rRNA processing factors
   PSH57_05405 (rnc)
Chromosome and associated proteins [BR:phef03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PSH57_05405 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2
Other DBs
NCBI-ProteinID: WLH13790
UniProt: A0ABY9GDQ5
LinkDB
Position
1250360..1251049
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEMARERVLAWLTSEIDSLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtttctctaagccgtctcgagcgtcagctcggctacaccttcaaggaccaggag
ctgatgctcctggctctcactcaccgcagttttgccgggcgcaacaacgaacgcctggaa
ttcctcggtgatgccatcctcaacttcgtggctggcgaggcgctgttcgagcgcttcccg
ctcgcccgcgaaggccagttgtcgcgtctgcgcgcgcgattggtaaaaggtgagaccctg
gccgtgctggcccgaggtttcgacttgggcgaatacctgcgcctgggctctggtgagttg
aaaagcggcggtttccgtcgtgagtcgattctggccgatgccctggaagcgttgattggc
gcgatctacctggatgccggcatggaaatggcgcgtgagcgcgtgctggcctggctgact
tccgagatcgacagcctgaccctggtggacaccaacaaggacccgaaaacccgtttgcag
gaattcctgcaatcacgcagttgcgagctgccgcgctacgaagtagtggacatccagggc
gagccgcattgccgaaccttcttcgtcgagtgcgaagtggtcttattgaatgaaaaaagc
cgggggcagggtgtgagtcgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga

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