Pseudomonas hefeiensis: PSH57_08335
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Entry
PSH57_08335 CDS
T09985
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef00300
Lysine biosynthesis
phef00470
D-Amino acid metabolism
phef01100
Metabolic pathways
phef01110
Biosynthesis of secondary metabolites
phef01120
Microbial metabolism in diverse environments
phef01230
Biosynthesis of amino acids
Module
phef_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSH57_08335 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSH57_08335 (dapF)
Enzymes [BR:
phef01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSH57_08335 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WLH14314
UniProt:
A0ABY9GF69
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All DBs
Position
1878606..1879427
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AA seq
273 aa
AA seq
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MPLSFHKMHANGDDFVVVDARNSTNPITNAMARRMGDRNRGIGFNQLAVMLDCEDADARL
MFWNADGSTLDVCGSATRGAADRLMRESNVTSITLRTHRGLLTCERTSPDAISVNMGQPL
FGWSDIPLAGDLDTAVLPLAGSPIACSMGNPHCTYFVEDLADVDIATIGPAIETSPLFPL
KTNVHFVQVINRKHIRLRIWERGGGIALGSGSCSCGAAVNGIRRGLLDHCVEVECDGGSV
TVQWDGLGPVFLIGPVEATFSGVITDSFQQIST
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagctttcataaaatgcacgccaatggcgatgattttgttgtcgtggacgcg
cgaaactcaaccaatcccataacaaatgccatggcccggcggatgggggatcgcaaccga
ggcatcggttttaatcaactcgcggtgatgctcgattgtgaggatgcagacgcgcgcctg
atgttctggaatgcagatggctccacgctggacgtttgcggcagcgcgacgcggggcgcc
gcggatcggttgatgcgcgaatcgaatgtgacttcgataacgctacgcacccatcgcggt
ttgctcacttgcgaacgaacttcacccgacgcaatttccgtcaacatggggcagccgctt
ttcggctggtcggacattcccttggctggggacctggacaccgctgttctgccactggct
ggcagcccgattgcgtgcagcatgggcaacccacactgcacttactttgtggaggatctg
gcggacgttgatatcgcgaccataggacctgcaatcgaaaccagccctttgttcccgctc
aagaccaacgtgcatttcgttcaggtcatcaatcgaaagcacattcgtttgcgcatatgg
gagcggggcggtggcatcgcactcggctcaggttcctgctcttgtggcgccgctgtgaac
gggattcgtcgtggcttgttggatcattgcgttgaggttgaatgtgatggtggcagcgtg
acggttcaatgggatggcctgggaccggtttttctcatcgggccggtagaggcaacgttt
tcgggagttatcaccgatagttttcagcaaatctcaacctga
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