Pseudomonas hefeiensis: PSH57_08980
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Entry
PSH57_08980 CDS
T09985
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
phef
Pseudomonas hefeiensis
Pathway
phef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSH57_08980 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phef03400
]
PSH57_08980 (uvrB)
DNA repair and recombination proteins [BR:
phef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSH57_08980 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSH57_08980 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Motif
Other DBs
NCBI-ProteinID:
WLH14429
UniProt:
A0ABY9GFS1
LinkDB
All DBs
Position
2049687..2051702
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPQAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPSGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEISKRVAVEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESARYEAELRSPSEISKRIRQLEEKMYQLARDLEFEAAAQLRDE
IGKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctagtcacccgattccagcccgccggcgaccagccgcaagccatt
cgcctgatggtcgaaggcatcgaggccgggctggcgcaccagacgctgctcggtgtgaca
ggctcgggcaagactttcagcatcgccaatgtgattgcccaggtgcagcgcccgaccctg
gtgctggcaccgaacaagaccctggcggcgcagctgtatggcgagttcaaggcgtttttc
cccaacaacgcggtggagtacttcgtctcctattacgactactaccaacccgaggcctac
gtaccgtcgtcggacaccttcatcgagaaggatgcttcgatcaacgatcacatcgaacag
atgcggctctcggccactaaggcattgctcgagcgcaaggacgcgatcatcgtcactacg
gtgtcgtgcatctatggcctgggcagcccggaaacgtacctgaagatggtcttgcacgtt
gatcgcggcgacaagctcgaccaacgcgccttgctgcgccgcctggcggacctgcaatac
acccgcaacgacatggatttcgcccgggcgacgttccgggtccgtggtgacgtgatcgac
atctacccggcggaatcggacctggaggcgatccgcatcgagctgttcgatgacgaggta
gagagtctttcggcgttcgatccgctgaccggcgaggtgatccgcaaactgccgcgcttc
accttctaccccaagagccactatgtgacgccacgggaaaccctgctggacgctatcgag
gggatcaaggttgagttgcaggagcgcctggaatacttgcggtcgaacaataaactggtg
gaagcccagcgtctggagcagcggacccgtttcgacctggagatgattctggaactgggt
tattgcaacggcatcgaaaactactcgcgctacctgtcgggtcgtccgtcgggcgcgcca
ccgcccacgttgtatgactatctgccggccgatgccttgctggtgatcgacgaatcccac
gtcagcgtgccccaggtcggcgccatgtacaaaggcgaccggtcccgcaaggaaaccctg
gtggaatacggtttccgcctgccctcggccctggataaccggccgatgcgctttgacgaa
tgggaaagtgtgagcccgcagacgattttcgtctcggccaccccaggcaactacgaggcc
gagcatgccggccgggtggtcgagcaggtggtgcggcccaccgggctggtcgatccgcag
gttgaagtgcgcccggcgctgactcaggtcgatgatctgctctcggaaatctccaaacgt
gtggcagtggaggagcgggtgttggtcaccacgctgaccaagcgcatggccgaagacctg
accgattatctggccgaccatggcgtgcgggtgcgctacctgcactcggacatcgacacg
gtggagcgggtcgagatcatccgcgacctgcgcctgggtacgttcgatgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgccggaggtgtccctggtggcgatcctcgac
gccgataaggaaggcttcctgcgctccgagcgttcgttgatccagaccatcggtcgggcc
gcgcgtaacctcaacggccgggcgattctctatgccgatcgcatcaccggctccatggag
cgggccatcggcgagaccgagcgtcgtcgcgataaacagattgccttcaacctggccaac
ggcatcacgcccaaaggggtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
cccggctcgcgcagcaagaagcgtaagggtatggccaaggccgccgaagagagcgcccgt
tacgaagccgaactgcgctcgccgagcgaaatcagcaaacgtatccgccagttggaagag
aaaatgtaccaactggcccgggatctggagttcgaagcagcggcgcagttgcgtgacgag
attggcaagctgcgcgagcggttgctgactgtctga
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integrated database retrieval system
