Pseudomonas hefeiensis: PSH57_09045
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Entry
PSH57_09045 CDS
T09985
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
phef
Pseudomonas hefeiensis
Pathway
phef00071
Fatty acid degradation
phef00280
Valine, leucine and isoleucine degradation
phef00310
Lysine degradation
phef00362
Benzoate degradation
phef00380
Tryptophan metabolism
phef00410
beta-Alanine metabolism
phef00640
Propanoate metabolism
phef00650
Butanoate metabolism
phef00907
Pinene, camphor and geraniol degradation
phef00930
Caprolactam degradation
phef01100
Metabolic pathways
phef01110
Biosynthesis of secondary metabolites
phef01120
Microbial metabolism in diverse environments
phef01200
Carbon metabolism
phef01212
Fatty acid metabolism
Module
phef_M00087
beta-Oxidation
phef_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
phef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSH57_09045 (fadB)
00650 Butanoate metabolism
PSH57_09045 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSH57_09045 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSH57_09045 (fadB)
00310 Lysine degradation
PSH57_09045 (fadB)
00380 Tryptophan metabolism
PSH57_09045 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSH57_09045 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSH57_09045 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSH57_09045 (fadB)
00930 Caprolactam degradation
PSH57_09045 (fadB)
Enzymes [BR:
phef01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSH57_09045 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSH57_09045 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSH57_09045 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSH57_09045 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WLH14437
LinkDB
All DBs
Position
2062113..2064260
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTVAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVEPGKLQEAALETLKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEQAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAQFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgatctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaactg
cgtcaggccgtggacaccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtattcatcgtcggtgccgacatcaccgagttcgtcgacaacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagccaaccgtattttcagcgacttcgaa
gacctcaacgtaccgaccgtcgcggccatcaacggcatcgccttgggtggcggcctggaa
atgtgcctggcagcggattatcgcgtcatgtccactgtggccaagatcggcctgccggaa
gtcaagctgggcatctacccgggttttggcggtaccgtgcgcctgccgcgcctcatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggcgccgtggatgccgtggtcgagcctggcaaactccaggaagcggcccttgaa
acgctcaagcgcgccatcagtggcgagttcgactacaaggccaagcgccagccgaagctg
gaaaagctcaagctcaacgccatcgaacaaatgatggctttcgaaaccgccaagggtttc
gtcgcaggtcaggcaggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaggccgcgaacttcggtcgcgacaaggccctggaagtcgaagccaccggtttcgtcaaa
ctggccaagacctcggctgcacagagcctgatcggtctgttcctcaatgaccaggaactg
aagaaaaaggccaaggcctacgacgaaattgctcgtgacgtgaagcaggccgccgtactc
ggcgccggtatcatgggcggcggtatcgcctaccagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggtatcgagcagggcctggccgaagccgccaagctg
ctggtcggtcgtgtcgataaaggtcgcatgaccgcggcgaagatggccgaagtgctcaac
ggcattcgtccaaccctgtcctacggcgattttggccatgtcgacctggtggtcgaggct
gtagtcgagaacccgaaggtcaagcaggcggtactggctgaagtcgaagacaaggtcaaa
gaggacactatcctcgcgtcgaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaatccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacaagcgatcgccaccaccgtggcc
tacgccaagaaaatgggcaaaaatccgatcgtcgtcaacgactgcccgggctttttggtc
aaccgcgtactgttcccgtatttcggcggtttcgccaagctggtcagcgccggtgtggac
tttgtacgcatcgacaagatcatggaaaagttcggctggccgatgggcccggcgtacctg
atggatgtggtcggcatcgacaccggccaccacggtcgtgacgtcatggctgaaggcttt
ccggaccgcatgaaagacgaccgccggtcggccgtcgacgtgctctacgaagccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagcgcggcaagcag
aagaaagtagccgattcctcggtgctggaagtgctcaagccgatcgtctatgagcagcgc
gaagtcaccgacgaagacatcatcaactggatgatgatcccgctgtgcctcgaaaccgtg
cgttgcctggaagacggtattgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcactgcgctacatcgactcgatcggtgtt
gcccagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgact
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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